; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G07310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G07310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEthylene-responsive transcription factor, putative
Genome locationClcChr06:7757734..7758254
RNA-Seq ExpressionClc06G07310
SyntenyClc06G07310
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574921.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5085.94Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGS---SSNSAAAPRRQGQG
        MDEE RS  DQGGEVRYRGVRRRPWGKFAAEIRDSSRNGAR+WLGTFNTAEEAARAYDRAAY+MRGHLAVLNFP+EYPSLGGS   SS+SA   RRQG G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGS---SSNSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
         +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

XP_008460635.1 PREDICTED: ethylene-responsive transcription factor ERF098 [Cucumis melo]7.3e-5186.92Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARIWLGTFNTAEEAARAYDRAAY+MRGHLAVLNFPNEYPSLGG     SSS+SAAAPR QG
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELE LDDKVLEELLEYEEKRKK
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

XP_022958792.1 ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]7.3e-5186.72Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGS---SSNSAAAPRRQGQG
        MDEE RS  DQGGEVRYRGVRRRPWGKFAAEIRDSSRNGAR+WLGTFNTAEEAARAYDRAAY+MRGHLAVLNFP+EYPSLGGS   SS+SA+A RRQG G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGS---SSNSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
         +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

XP_023006327.1 ethylene-responsive transcription factor ERF098-like [Cucurbita maxima]6.6e-5286.82Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSA----AAPRRQGQ
        MDEE RS +DQGGEVRYRGVRRRPWGKFAAEIRDSSRNGAR+WLGTFNTAEEAARAYDRAAY+MRGHLAVLNFP+EYPSLGGSSS S+    A PRRQGQ
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSA----AAPRRQGQ

Query:  GDQSQVIELECLDDKVLEELLEYEEKRKK
        G +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  GDQSQVIELECLDDKVLEELLEYEEKRKK

XP_038876105.1 ethylene-responsive transcription factor ERF098-like [Benincasa hispida]5.8e-5692.8Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQS
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARIWLGTFNTAEEAARAYDRAAY+MRGHLAVLNFPNEYPSLGGSSS +A   RRQGQGDQS
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQS

Query:  QVIELECLDDKVLEELLEYEEKRKK
        QVIELECLDDKVLEELLEYEEKRKK
Subjt:  QVIELECLDDKVLEELLEYEEKRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LI84 AP2/ERF domain-containing protein5.1e-5084.62Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARIWLGTFNTAEEAARAYDRAAY+MRGHLAVLNFPNEYPSLGG     SSS+SAAAPR +G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELECLDDKVLEELL YEE+R K
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

A0A1S3CCW3 ethylene-responsive transcription factor ERF0983.5e-5186.92Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARIWLGTFNTAEEAARAYDRAAY+MRGHLAVLNFPNEYPSLGG     SSS+SAAAPR QG
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELE LDDKVLEELLEYEEKRKK
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

A0A5A7VH52 Ethylene-responsive transcription factor ERF0983.5e-5186.92Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARIWLGTFNTAEEAARAYDRAAY+MRGHLAVLNFPNEYPSLGG     SSS+SAAAPR QG
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGG-----SSSNSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELE LDDKVLEELLEYEEKRKK
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

A0A6J1H2T4 ethylene-responsive transcription factor ERF098-like3.5e-5186.72Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGS---SSNSAAAPRRQGQG
        MDEE RS  DQGGEVRYRGVRRRPWGKFAAEIRDSSRNGAR+WLGTFNTAEEAARAYDRAAY+MRGHLAVLNFP+EYPSLGGS   SS+SA+A RRQG G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGS---SSNSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
         +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

A0A6J1KVJ6 ethylene-responsive transcription factor ERF098-like3.2e-5286.82Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSA----AAPRRQGQ
        MDEE RS +DQGGEVRYRGVRRRPWGKFAAEIRDSSRNGAR+WLGTFNTAEEAARAYDRAAY+MRGHLAVLNFP+EYPSLGGSSS S+    A PRRQGQ
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSA----AAPRRQGQ

Query:  GDQSQVIELECLDDKVLEELLEYEEKRKK
        G +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  GDQSQVIELECLDDKVLEELLEYEEKRKK

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI57.4e-2278.69Show/hide
Query:  RYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE
        +YRGVRRRPWGK+AAEIRDS+R+GAR+WLGTF TAEEAA AYDRAA+ MRG  A+LNFP+E
Subjt:  RYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE

P93822 Ethylene-responsive transcription factor 147.9e-3259.38Show/hide
Query:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQG
        MD+ GRS+   GG   + +YRGVRRRPWGK+AAEIRDS ++G R+WLGTF+TAE+AARAYDRAAY MRG  A+LNFP+EY ++G  SS++AA        
Subjt:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
           QV E E LDD VL+ELLEY E   K
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

Q9LSX0 Ethylene-responsive transcription factor ERF0963.3e-3058.91Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQS
        MD+ GR    + G  +YRGVRRRPWGK+AAEIRDS ++G R+WLGTF+TAEEAARAYD+AAY MRG  A+LNFP+EY    G SS++A A         S
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQS

Query:  ----QVIELECLDDKVLEELLEYEEKRKK
            QV E E LDD VLEELLE  EK  K
Subjt:  ----QVIELECLDDKVLEELLEYEEKRKK

Q9LTC5 Ethylene-responsive transcription factor ERF0986.5e-3457.55Show/hide
Query:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE-YPSL-----------GGSSS
        M+   RS+N+Q     + R+RGVRRRPWGKFAAEIRD SRNGAR+WLGTF TAEEAARAYDRAA+ +RGHLA+LNFPNE YP +             SSS
Subjt:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE-YPSL-----------GGSSS

Query:  NSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK
        +S +      + +Q +V E E LDDKVLEELL+ EE+++
Subjt:  NSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK

Q9LTC6 Ethylene-responsive transcription factor ERF0951.1e-3061.02Show/hide
Query:  EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSL----GGSSSNSAAAP----RRQGQGDQS-QVIE
        E++YRGVR+RPWGK+AAEIRDS+R+GAR+WLGTFNTAE+AARAYDRAA+ MRG  A+LNFP+EY  +     GS  N+ A+     R  G GD   +VIE
Subjt:  EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSL----GGSSSNSAAAP----RRQGQGDQS-QVIE

Query:  LECLDDKVLEELLEYEEK
         E LDD +LEELL+Y E+
Subjt:  LECLDDKVLEELLEYEEK

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 145.6e-3359.38Show/hide
Query:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQG
        MD+ GRS+   GG   + +YRGVRRRPWGK+AAEIRDS ++G R+WLGTF+TAE+AARAYDRAAY MRG  A+LNFP+EY ++G  SS++AA        
Subjt:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
           QV E E LDD VL+ELLEY E   K
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

AT3G23220.1 Integrase-type DNA-binding superfamily protein8.1e-3261.02Show/hide
Query:  EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSL----GGSSSNSAAAP----RRQGQGDQS-QVIE
        E++YRGVR+RPWGK+AAEIRDS+R+GAR+WLGTFNTAE+AARAYDRAA+ MRG  A+LNFP+EY  +     GS  N+ A+     R  G GD   +VIE
Subjt:  EVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSL----GGSSSNSAAAP----RRQGQGDQS-QVIE

Query:  LECLDDKVLEELLEYEEK
         E LDD +LEELL+Y E+
Subjt:  LECLDDKVLEELLEYEEK

AT3G23230.1 Integrase-type DNA-binding superfamily protein4.6e-3557.55Show/hide
Query:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE-YPSL-----------GGSSS
        M+   RS+N+Q     + R+RGVRRRPWGKFAAEIRD SRNGAR+WLGTF TAEEAARAYDRAA+ +RGHLA+LNFPNE YP +             SSS
Subjt:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE-YPSL-----------GGSSS

Query:  NSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK
        +S +      + +Q +V E E LDDKVLEELL+ EE+++
Subjt:  NSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK

AT3G23240.1 ethylene response factor 11.7e-2167.61Show/hide
Query:  RSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE
        +S + +  E  YRGVRRRPWGKFAAEIRDS+RNG R+WLGTF +AEEAA AYD+AA+ MRG  A+LNF  E
Subjt:  RSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNE

AT5G43410.1 Integrase-type DNA-binding superfamily protein2.4e-3158.91Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQS
        MD+ GR    + G  +YRGVRRRPWGK+AAEIRDS ++G R+WLGTF+TAEEAARAYD+AAY MRG  A+LNFP+EY    G SS++A A         S
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQS

Query:  ----QVIELECLDDKVLEELLEYEEKRKK
            QV E E LDD VLEELLE  EK  K
Subjt:  ----QVIELECLDDKVLEELLEYEEKRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGGAAGGGAGGTCCAACAATGATCAAGGTGGTGAGGTTCGATATCGCGGTGTACGACGTCGTCCTTGGGGGAAATTTGCAGCGGAGATTCGGGACTCGTCGAG
AAATGGGGCTCGGATTTGGCTTGGAACATTCAACACGGCGGAGGAGGCAGCTCGAGCCTACGACCGAGCTGCCTATCTCATGCGTGGTCATTTGGCTGTCCTGAATTTCC
CTAATGAATATCCTTCTCTTGGTGGGAGTTCTTCTAATTCTGCTGCAGCTCCTAGGCGCCAAGGGCAAGGTGATCAAAGCCAAGTGATTGAATTGGAATGTCTTGATGAT
AAGGTGCTTGAAGAACTACTTGAGTATGAGGAGAAAAGGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGGAAGGGAGGTCCAACAATGATCAAGGTGGTGAGGTTCGATATCGCGGTGTACGACGTCGTCCTTGGGGGAAATTTGCAGCGGAGATTCGGGACTCGTCGAG
AAATGGGGCTCGGATTTGGCTTGGAACATTCAACACGGCGGAGGAGGCAGCTCGAGCCTACGACCGAGCTGCCTATCTCATGCGTGGTCATTTGGCTGTCCTGAATTTCC
CTAATGAATATCCTTCTCTTGGTGGGAGTTCTTCTAATTCTGCTGCAGCTCCTAGGCGCCAAGGGCAAGGTGATCAAAGCCAAGTGATTGAATTGGAATGTCTTGATGAT
AAGGTGCTTGAAGAACTACTTGAGTATGAGGAGAAAAGGAAGAAGTGAAATCTCAAATCACATTTAATAATAAAGTGCCTTTTGAATAAGGAATAAAATATGGTAATTAA
CCTAGCTAACTTGGGGATTTGTGTCTATCAATAATTTGTGTGTTGTAATTTCCCCAATTGTTGGTCTATATAATTATGGAG
Protein sequenceShow/hide protein sequence
MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRNGARIWLGTFNTAEEAARAYDRAAYLMRGHLAVLNFPNEYPSLGGSSSNSAAAPRRQGQGDQSQVIELECLDD
KVLEELLEYEEKRKK