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Clc06G07350 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G07350
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPathogen induced 4 protein
Genome locationClcChr06:7885467..7886697
RNA-Seq ExpressionClc06G07350
SyntenyClc06G07350
Gene Ontology termsGO:0051301 - cell division (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABF19725.1 pathogen induced 4 protein [Cucumis sativus]2.1e-2073.86Show/hide
Query:  MSKKYLVILVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPPPPRVRRPKPPSSN
        MS K+LVIL+LGVILLSTQVIARPYY  E HH+LTPSATV SAVG+SLQK+PPWL+KIFPKKPPK          PPR RR KPPSSN
Subjt:  MSKKYLVILVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPPPPRVRRPKPPSSN
KGN61604.1 hypothetical protein Csa_006693 [Cucumis sativus]2.1e-1257.84Show/hide
Query:  MSKKYLVI-LVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIF--------PKKPPKLPNIN----LPPPPPPR-VRRPKPPS
        MS+KYLVI L+LGVILLSTQV+ARPYY  E HHKLTPSATVS+A     + + P+ +K F        PKK PK P +      PPPPPPR VR  +PPS
Subjt:  MSKKYLVI-LVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIF--------PKKPPKLPNIN----LPPPPPPR-VRRPKPPS

Query:  SN
        SN
Subjt:  SN
TYK15521.1 Cell division protein ftsH, putative isoform 3 [Cucumis melo var. makuwa]3.6e-1273.21Show/hide
Query:  VIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
        VIAR YY PE HH+LTPSATV SAVG SL K+PPWL+K FPKK P+LP I  PPPP
Subjt:  VIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
XP_016902583.1 PREDICTED: uncharacterized protein LOC107991740 [Cucumis melo]1.5e-1875Show/hide
Query:  MSKKYLVILVLGVILL-STQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
        MS K+LVIL+LGVILL STQVIAR YY PE HH+LTPSATV SAVG SL K+PPWL+K FPKK P+LP I  PPPP
Subjt:  MSKKYLVILVLGVILL-STQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
TrEMBL top hitse value%identityAlignment
A0A0A0LKM8 Uncharacterized protein1.0e-1257.84Show/hide
Query:  MSKKYLVI-LVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIF--------PKKPPKLPNIN----LPPPPPPR-VRRPKPPS
        MS+KYLVI L+LGVILLSTQV+ARPYY  E HHKLTPSATVS+A     + + P+ +K F        PKK PK P +      PPPPPPR VR  +PPS
Subjt:  MSKKYLVI-LVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIF--------PKKPPKLPNIN----LPPPPPPR-VRRPKPPS

Query:  SN
        SN
Subjt:  SN
A0A1S4E2Y7 uncharacterized protein LOC1079917407.4e-1975Show/hide
Query:  MSKKYLVILVLGVILL-STQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
        MS K+LVIL+LGVILL STQVIAR YY PE HH+LTPSATV SAVG SL K+PPWL+K FPKK P+LP I  PPPP
Subjt:  MSKKYLVILVLGVILL-STQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
A0A5D3CUG0 Cell division protein ftsH, putative isoform 31.8e-1273.21Show/hide
Query:  VIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
        VIAR YY PE HH+LTPSATV SAVG SL K+PPWL+K FPKK P+LP I  PPPP
Subjt:  VIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPP
A0MCW3 Pathogen induced 4 protein1.0e-2073.86Show/hide
Query:  MSKKYLVILVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPPPPRVRRPKPPSSN
        MS K+LVIL+LGVILLSTQVIARPYY  E HH+LTPSATV SAVG+SLQK+PPWL+KIFPKKPPK          PPR RR KPPSSN
Subjt:  MSKKYLVILVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPPPPRVRRPKPPSSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAACTTCGCTATAAAAAGCCACCTTAAGTTTGAGCATTTCAACAAGCAAGTGAAACAAATCCCCAAAAAAGCCACCAAAATGTCTAAAAAGTATTTGGTTATTCT
TGTTCTTGGAGTGATTCTTCTTAGCACTCAAGTAATTGCTCGACCTTATTACCAGCCAGAGACCCACCACAAACTCACTCCCTCCGCCACCGTCTCATCGGCGGTCGGGG
ACTCTTTGCAAAAGATTCCACCTTGGTTGAGGAAAATTTTTCCCAAAAAACCTCCCAAACTCCCAAATATCAACTTGCCACCACCACCACCGCCGCGGGTTCGCAGACCA
AAACCACCTTCTTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
GTCAATTGCAAAAATAATGCAAAACTTCGCTATAAAAAGCCACCTTAAGTTTGAGCATTTCAACAAGCAAGTGAAACAAATCCCCAAAAAAGCCACCAAAATGTCTAAAA
AGTATTTGGTTATTCTTGTTCTTGGAGTGATTCTTCTTAGCACTCAAGTAATTGCTCGACCTTATTACCAGCCAGAGACCCACCACAAACTCACTCCCTCCGCCACCGTC
TCATCGGCGGTCGGGGACTCTTTGCAAAAGATTCCACCTTGGTTGAGGAAAATTTTTCCCAAAAAACCTCCCAAACTCCCAAATATCAACTTGCCACCACCACCACCGCC
GCGGGTTCGCAGACCAAAACCACCTTCTTCCAACTGATTCAAAGGTGTTTAATGAAGCAGCACCACCATAACTGGTGTGTGTTCTCTCAAGCTCGAGATGGATGATTATC
GGAAGTTTACTTTTATGTAATATGTTTTAATTATTGGTGTAATCTACGTACACATGTCTCATGTGGGTACGATATGCTTTTTTTAAAAAAATAAATATAGGGTAAAGTTT
TGAATATTTAACTAAAAGAAAAGTTGTTGTCGCCTGTTATATATATAAATTTGAAGGAATATGATTGTTTTCTTCATCATTTGCGGCCTTTTCCTTTAATTTTTTAGAAT
GTTTGAGAATTGTATTTTAATTCTACTTTAGATATATAATATTGTAATAATTATGGTTAAATTTTAATTGAAAATCTAAAAAATGACAACGCACCATAGATCTCTAAAGA
AAATTATACAAATTATTTTTGAACTATGAAGTTAATTACAATCACACTTATGAACGTCTTTCAATTTGATCAATTATGCTTCTGTAGTTGGATTACCATCAACTCTATTT
ATTAAATTAATTTTTATTTATGGATAATTCACACATAGATAAAAAAAAGACAAAGTTGTTATATTAAAAAAAAAAAATATATTGGAGATGAATAAAATGGAAGGGAATAG
AACTAAAAAAAAATCAAATGGGATGGATAAAACTAGCATCTTTGTATTATTTTTTTTAAAAAAAATAATAACAAAAATGAATATCAAAAGGAAATAATCAAATTAATGTT
CTACCAAACATGTTGTTTGTCATTGAAGAGAGTGTCATCTTCCAAAGTGACAAAAAAAAAAAGTCGTGCAATTTGCAAAACTTGGCTTGCCATGGACCACAGTAACAGTT
TCGATCCCGTGACACAACCAC
Protein sequenceShow/hide protein sequence
MQNFAIKSHLKFEHFNKQVKQIPKKATKMSKKYLVILVLGVILLSTQVIARPYYQPETHHKLTPSATVSSAVGDSLQKIPPWLRKIFPKKPPKLPNINLPPPPPPRVRRP
KPPSSN