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Clc06G07370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G07370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:7933946..7934571
RNA-Seq ExpressionClc06G07370
SyntenyClc06G07370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065660.1 hypothetical protein E6C27_scaffold90G001190 [Cucumis melo var. makuwa]1.2e-0850.6Show/hide
Query:  MYVKWVMVFAIAVVLLT----AEAHQPTLTQNDPYYP-KEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKN-AYDRCKPPMSD
        M ++W MVF IAV+LL+    AE H+P LTQ+DPYYP KE+ES        VG     + +PK GK C K   Y +CKPPMSD
Subjt:  MYVKWVMVFAIAVVLLT----AEAHQPTLTQNDPYYP-KEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKN-AYDRCKPPMSD
KAA0065661.1 hypothetical protein E6C27_scaffold90G001210 [Cucumis melo var. makuwa]2.2e-0550.65Show/hide
Query:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHG-KGCHKNAYDRCK
        M +KWVMVFAIA+VLLTA    EAH+P LTQNDP           E K  VG      T P HG KGC K  +  CK
Subjt:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHG-KGCHKNAYDRCK
KGN61603.1 hypothetical protein Csa_006268 [Cucumis sativus]2.0e-0650Show/hide
Query:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKNAYDRCK
        M +KWVMVFAIA+VLLTA    EAH+PTLT NDP           E K  VG  GD +     GKGC K  +  CK
Subjt:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKNAYDRCK
TrEMBL top hitse value%identityAlignment
A0A0A0LII8 Uncharacterized protein9.6e-0750Show/hide
Query:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKNAYDRCK
        M +KWVMVFAIA+VLLTA    EAH+PTLT NDP           E K  VG  GD +     GKGC K  +  CK
Subjt:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKNAYDRCK
A0A5A7VEN6 Uncharacterized protein6.0e-0950.6Show/hide
Query:  MYVKWVMVFAIAVVLLT----AEAHQPTLTQNDPYYP-KEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKN-AYDRCKPPMSD
        M ++W MVF IAV+LL+    AE H+P LTQ+DPYYP KE+ES        VG     + +PK GK C K   Y +CKPPMSD
Subjt:  MYVKWVMVFAIAVVLLT----AEAHQPTLTQNDPYYP-KEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKN-AYDRCKPPMSD
A0A5A7VIV6 Uncharacterized protein1.1e-0550.65Show/hide
Query:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHG-KGCHKNAYDRCK
        M +KWVMVFAIA+VLLTA    EAH+P LTQNDP           E K  VG      T P HG KGC K  +  CK
Subjt:  MYVKWVMVFAIAVVLLTA----EAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHG-KGCHKNAYDRCK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTGAAATGGGTAATGGTGTTTGCAATTGCAGTGGTGCTTCTCACCGCTGAGGCTCACCAGCCAACGCTTACTCAAAATGATCCTTATTATCCTAAGGAAATGGA
GTCGTCCGTGGCTGAAAAAAAGAAGTTCGTGGGCCAACGCGGTGATCACAGTACCGATCCTAAGCACGGAAAAGGATGCCATAAAAACGCATATGACAGGTGCAAGCCAC
CCATGTCCGACTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAGAGGTAATAAAAATGTATGTGAAATGGGTAATGGTGTTTGCAATTGCAGTGGTGCTTCTCACCGCTGAGGCTCACCAGCCAACGCTTACTCAAAATGA
TCCTTATTATCCTAAGGAAATGGAGTCGTCCGTGGCTGAAAAAAAGAAGTTCGTGGGCCAACGCGGTGATCACAGTACCGATCCTAAGCACGGAAAAGGATGCCATAAAA
ACGCATATGACAGGTGCAAGCCACCCATGTCCGACTGAATGGCTCTCCCTCTGTGTTTAGATTGGCCACTCTGTTGGGGACAATATATATGCCTTATCTACTAAATAAAA
CTATTCCAAAAGCCTATGTATCGGCTGCTCCCACCGATATGGTCTCTTAAATATTATTGTAATGTAATAATGCTAGTGTTCTACTTGGTGTCTTTTTCTCTGTAACATTA
ATGTTTGTATTTGCATCTTCATGTATTTTCACCTTATTTTTGTTTCTAGCAATTTTAGCAGGATTTCCAGCTTAACTCTCAGCTTTTTATTTTCCTTTCGGCTTAAGAAT
GTGATATGGGTAAAACTAGACTTCAAAAAGATACACTAAAGACTATCAAAATCTATTAGTAATAGATAGACTCTTA
Protein sequenceShow/hide protein sequence
MYVKWVMVFAIAVVLLTAEAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKNAYDRCKPPMSD