; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G07800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G07800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit B
Genome locationClcChr06:8503140..8507044
RNA-Seq ExpressionClc06G07800
SyntenyClc06G07800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16764.1 uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa]3.3e-4874.23Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLSAASSR+R  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        +KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

XP_004147168.1 uncharacterized protein LOC101209470 [Cucumis sativus]4.3e-4873.17Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLS ASSRNR  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF
        +KDSKQNAA+DLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLRE+EKNGTL+S SQ RKHNF
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF

XP_008460696.1 PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo]9.6e-4873.62Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LC LNLVAAFLLLQGFLSAASSR+R  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        +KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

XP_022138362.1 uncharacterized protein LOC111009555 [Momordica charantia]3.9e-4972.84Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCL-----VREIQQEAYYGTQDVQE
        MEVQQ WRLRFSF+NATI +CLLNLVAAF LLQGFLSAASSRNR SSTNP+L          + +    +  F    L     VREI++EA+Y T+ VQE
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCL-----VREIQQEAYYGTQDVQE

Query:  KDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTLSS SQPRKHN
Subjt:  KDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

XP_038874445.1 uncharacterized protein LOC120067104 [Benincasa hispida]6.4e-5276.83Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LCLLNLVA FLLLQGFLSAASSRNR SSTN NL        +    LS + LE   +        VREIQQEA+Y T+DVQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF
        +KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTLSSS QPRKHNF
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF

TrEMBL top hitse value%identityAlignment
A0A0A0LNL1 Uncharacterized protein2.1e-4873.17Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLS ASSRNR  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF
        +KDSKQNAA+DLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLRE+EKNGTL+S SQ RKHNF
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF

A0A1S3CD43 uncharacterized protein LOC1034994644.6e-4873.62Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LC LNLVAAFLLLQGFLSAASSR+R  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        +KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

A0A5A7SNT0 Uncharacterized protein4.6e-4873.62Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LC LNLVAAFLLLQGFLSAASSR+R  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        +KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

A0A5D3D0K8 Uncharacterized protein1.6e-4874.23Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ
        MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLSAASSR+R  STN  L        A    LS + LE   +        VREIQ+EAYY T+ VQ
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------ALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQ

Query:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        +KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Subjt:  EKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

A0A6J1CAW5 uncharacterized protein LOC1110095551.9e-4972.84Show/hide
Query:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCL-----VREIQQEAYYGTQDVQE
        MEVQQ WRLRFSF+NATI +CLLNLVAAF LLQGFLSAASSRNR SSTNP+L          + +    +  F    L     VREI++EA+Y T+ VQE
Subjt:  MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCL-----VREIQQEAYYGTQDVQE

Query:  KDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN
        KDSKQNAAIDLSKRLKDFRSLNDASSLKA+EEWRKRKMERARLREMEKNGTLSS SQPRKHN
Subjt:  KDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04555.1 unknown protein3.3e-3050.98Show/hide
Query:  VQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCL---VREIQQEAYYGTQDVQEKDSK
        +   WR+RFSF+NATI L ++N++    LLQGF +++SS +  SS+   ++  +     +E+L  K +    P  L   VREI+QEA  G +  Q+KD K
Subjt:  VQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCL---VREIQQEAYYGTQDVQEKDSK

Query:  QNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQ
        Q  A+DLSKRLKDFR+LNDASSLKA+EEWRKRKMERAR R++EK G +SSS++
Subjt:  QNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTCAACAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATAGTTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATC
TGCTGCTTCTTCCCGCAACAGACTCTCCTCAACAAATCCCAATTTGGCTCTTGCTGTTCCTCCCCATTTGAGTTCTGAAAAGCTTGAAGGAAAGAACAAGCATAATTTTT
GCCCTGATTGTTTGGTAAGGGAAATTCAGCAGGAAGCATATTATGGAACACAAGATGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTG
AAAGACTTCCGTTCTCTCAACGATGCTTCCAGCTTAAAGGCTATTGAGGAATGGCGCAAACGAAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACT
GAGTTCTTCTTCTCAGCCTCGAAAACACAACTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATAAGAACAACCAAAGCTGAAGAGAAGAAGAGGAGCAGCAGTTGAATTGAGTTGAAGAATTTCCCTTGAAACATAAATACGTCTTCTTGACTTTCGATTTCAGAGAGAAG
AGTTTCTACACGAATCTCCTCCCATTTTCCCCAATTACCCACTAACTTATTTTCTTCATTTTTTGAAAAGCATCGCCATCATCAGCTCCAGAATTCTCTGGTGTTGCTTC
TAATTTCTTCAGCTTCGATGTAAACAGCTGAATGGGTATTTGGGAAACCAAAGGGAATATCGATTGAGAGTTTCGGTAGAAGAAGAAAATGGAGGTTCAACAGTCATGGA
GATTGAGATTCTCGTTTAGGAATGCGACCATAGTTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGA
CTCTCCTCAACAAATCCCAATTTGGCTCTTGCTGTTCCTCCCCATTTGAGTTCTGAAAAGCTTGAAGGAAAGAACAAGCATAATTTTTGCCCTGATTGTTTGGTAAGGGA
AATTCAGCAGGAAGCATATTATGGAACACAAGATGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAACG
ATGCTTCCAGCTTAAAGGCTATTGAGGAATGGCGCAAACGAAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTTCTTCTCAGCCTCGA
AAACACAACTTCTAAATCTGTATGAACTTTCTTTGTACCTTGTATAACAAACTTGTCTATGTGATTCTAAAGTGAAAAGCATCATATCTCTTCTTTTTACATATGACTAC
CCTTTTATAAAAACAGAGTTTGAGTGACTCAGAAGCTCAAAGTTTATTATATATATTAAATTTGTACAACAAATGTCTATGGACAACATGTGAT
Protein sequenceShow/hide protein sequence
MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRL
KDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF