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Clc06G07810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G07810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAWPM-19-like family protein
Genome locationClcChr06:8511899..8513150
RNA-Seq ExpressionClc06G07810
SyntenyClc06G07810
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008390 - AWPM-19-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147191.1 membrane protein PM19L [Cucumis sativus]5.9e-9497.22Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGT GTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

XP_008460698.1 PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]2.0e-9497.78Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

XP_022959288.1 uncharacterized protein LOC111460317 [Cucurbita moschata]2.5e-9295.56Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGGNGATPFFLT AMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

XP_023549469.1 membrane protein PM19L [Cucurbita pepo subsp. pepo]7.2e-9295Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGGNGATPFFLT AMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

XP_038874443.1 membrane protein PM19L [Benincasa hispida]1.6e-9497.78Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLF+NLI+YLIL+GFASWCLNRYINGTTYHPSMGGNGATPFFLT AMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

TrEMBL top hitse value%identityAlignment
A0A0A0LI45 Uncharacterized protein2.9e-9497.22Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGT GTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

A0A1S3CDH8 uncharacterized protein LOC1034994669.8e-9597.78Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

A0A6J1CDE2 uncharacterized protein LOC1110097053.2e-8590.56Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+Y IL+GFASWCLNRYINGTTYHPSMGGNGATPFFLT AMLTAVLGVASKLAGLYHIRAWRSDSLAGAGS S++TWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACK+I+IGGHRGWRLRVVEAFIIIL  TQLLY+LLLHAGIFSR YGPGY +TDYGMGGGTAA GE PKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

A0A6J1H5I7 uncharacterized protein LOC1114603171.2e-9295.56Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGGNGATPFFLT AMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

A0A6J1KYX7 uncharacterized protein LOC1114988582.1e-8993.89Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGG+  TPFFLT AMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

SwissProt top hitse value%identityAlignment
Q6L4D2 Membrane protein PM19L2.1e-4960.9Show/hide
Query:  MGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGL
        +GR M APLL LNLI+YLI++GFASW LN YING T HP + GNGAT +FL  A+L  V+G ASKLAG++H+R+W + SLA   +++L+ WA+T LAFGL
Subjt:  MGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGL

Query:  ACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRY--GPGYWDTDY
        ACK+I+IGG+RGWRLRV+EAF+IIL FTQLLY+ +LH G+FS  +  G G +  DY
Subjt:  ACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRY--GPGYWDTDY

Arabidopsis top hitse value%identityAlignment
AT1G04560.1 AWPM-19-like family protein2.5e-6673.91Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MA T+GRN+AAPLLFLNL++YLI+LGFASWCLN+YING T HPS GGNGATPFFLT ++L AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T L
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMG
        A GLACKQINIGG RGWRL+++EAFIIILTFTQLLYL+L+HAG  S +YGPGY D DY  G
Subjt:  AFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMG

AT1G29520.1 AWPM-19-like family protein2.2e-2240.26Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYI-NGTTYHPSMG------------GNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGA
        MA    + +A+ LL LN  +Y+I+LG   W +NR I +G    P++             GN AT FF+  A+L  V+G AS ++GL HIR+W   SL  A
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYI-NGTTYHPSMG------------GNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGA

Query:  GSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLH
         + + + W +TVLA G A K+I + G R  +LR +EAF+IIL+ TQL+Y+  +H
Subjt:  GSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLH

AT5G18970.1 AWPM-19-like family protein3.0e-1937.58Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSM-------------GGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGA
        MA    ++ A  LL LNL LY ++   ASW +N  I  T    S               GN AT FF+   ++  V+G+A+ L G+ ++  W S +L  A
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSM-------------GGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGA

Query:  GSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI
         ++SL++W++T+LA GLACK+INIG      LR +E   II++ TQLL    +HAG+
Subjt:  GSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI

AT5G46530.1 AWPM-19-like family protein1.9e-2138.71Show/hide
Query:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYIN-----GTTY---------HPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAG
        M +   + +A+ LL LN  +Y I+LG  +W +N+ IN     G  Y         H  M GN AT FF+  A++  V G AS ++G+ H+++W + SL  
Subjt:  MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYIN-----GTTY---------HPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAG

Query:  AGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLH
        A S + + W++T+LA G  CK+I + G R  RLR +EAF+IIL+ TQLLY+  ++
Subjt:  AGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAACCATGGGAAGGAATATGGCAGCTCCATTGCTGTTTCTCAACTTGATTTTATATTTGATTCTCTTAGGTTTTGCTAGTTGGTGCCTTAATAGATACATCAA
TGGCACAACCTACCATCCTAGTATGGGAGGAAACGGAGCGACGCCGTTTTTCTTGACAATGGCAATGTTGACGGCAGTTCTGGGAGTGGCATCAAAACTGGCTGGACTCT
ACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGAGCGGGATCGACTTCCTTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAAC
ATAGGAGGGCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATCTTGACTTTCACTCAGCTTCTGTATCTGCTCTTGCTCCACGCCGGAATCTTCAGCCG
CCGCTATGGCCCTGGTTATTGGGACACCGATTATGGCATGGGCGGAGGAACAGCGGCTCCCGGTGAGCCTCCCAAAGGAACTGCCGGGACCAGGGTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAAACGATGGCTCAAACCATGGGAAGGAATATGGCAGCTCCATTGCTGTTTCTCAACTTGATTTTATATTTGATTCTCTTAGGTTTTGCTAGTTGGTGCCTTAATAG
ATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGAAACGGAGCGACGCCGTTTTTCTTGACAATGGCAATGTTGACGGCAGTTCTGGGAGTGGCATCAAAACTGG
CTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGAGCGGGATCGACTTCCTTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAG
CAAATCAACATAGGAGGGCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATCTTGACTTTCACTCAGCTTCTGTATCTGCTCTTGCTCCACGCCGGAAT
CTTCAGCCGCCGCTATGGCCCTGGTTATTGGGACACCGATTATGGCATGGGCGGAGGAACAGCGGCTCCCGGTGAGCCTCCCAAAGGAACTGCCGGGACCAGGGTGGTTT
AGGATAGATGGTTGTGTATGATAGCAGTGGGTTTGGTTTTCTCTTGTTTTCTTTTTCTGTGCAAGAACATAGTTTTCTGGTTCTGTCAATCTGCTTCAAAAC
Protein sequenceShow/hide protein sequence
MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQIN
IGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV