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Clc06G07970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G07970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionsmall acidic protein 1
Genome locationClcChr06:8719982..8721910
RNA-Seq ExpressionClc06G07970
SyntenyClc06G07970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0980Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0980Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
XP_022964281.1 small acidic protein 1 [Cucurbita moschata]1.1e-0980Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]1.1e-0980Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
XP_038875245.1 small acidic protein 1 [Benincasa hispida]6.2e-1082.22Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
TrEMBL top hitse value%identityAlignment
A0A0A0LNK1 Uncharacterized protein7.4e-0977.78Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
A0A1S3CCM1 small acidic protein 17.4e-0977.78Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
A0A5A7SMJ5 Small acidic protein 17.4e-0977.78Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
A0A6J1HIH2 small acidic protein 15.1e-1080Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
A0A6J1KE12 small acidic protein 15.1e-1080Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEG  S+  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
SwissProt top hitse value%identityAlignment
Q9T0H2 Small acidic protein 13.1e-0444.44Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRP  ++  +E+++ GS++AMDVDD++ +EIL EGG  S  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
Arabidopsis top hitse value%identityAlignment
AT4G13520.1 small acidic protein 12.2e-0544.44Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE
        MRP  ++  +E+++ GS++AMDVDD++ +EIL EGG  S  +L +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACAAGGATCGACGGTCGCCATGGACGTGGACGATGTGGACCCACTTGAGATATTGGGCGAGGGTGGGGG
ATCATCACATTGCCAGTTAGGAGAGTTGATGCAGTTAGGACTTGAGATGTTTATTAGAGAGCTTATGAAGACAGTTAGACACATAGTGAAGTATCTGATGGTTTTGCCAT
CTCACTCAAAATCACAACCACAATGTGTGTTGAACCCACAACAGCCCCAACAAATGATTGCACATGCTCTTAGTCATGTGAATTCTTTTTTCTGTGAGTTTATAGAAGCA
TTGGTACATGGCCTGATTGCATTTGCCATTGAGCAGGAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACAAGGATCGACGGTCGCCATGGACGTGGACGATGTGGACCCACTTGAGATATTGGGCGAGGGTGGGGG
ATCATCACATTGCCAGTTAGGAGAGTTGATGCAGTTAGGACTTGAGATGTTTATTAGAGAGCTTATGAAGACAGTTAGACACATAGTGAAGTATCTGATGGTTTTGCCAT
CTCACTCAAAATCACAACCACAATGTGTGTTGAACCCACAACAGCCCCAACAAATGATTGCACATGCTCTTAGTCATGTGAATTCTTTTTTCTGTGAGTTTATAGAAGCA
TTGGTACATGGCCTGATTGCATTTGCCATTGAGCAGGAACCATGA
Protein sequenceShow/hide protein sequence
MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGGGSSHCQLGELMQLGLEMFIRELMKTVRHIVKYLMVLPSHSKSQPQCVLNPQQPQQMIAHALSHVNSFFCEFIEA
LVHGLIAFAIEQEP