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Clc06G08070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr06:9016282..9017109
RNA-Seq ExpressionClc06G08070
SyntenyClc06G08070
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902587.1 PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo]4.9e-7591.72Show/hide
Query:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK L TIL LF  SAFSF +FI+QPD+LYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        +SFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDE+NWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_023000578.1 S-protein homolog 5 [Cucurbita maxima]4.8e-7087.41Show/hide
Query:  KKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS
        KKK+L+TIL L  +SAFSFF+FIIQPD+LYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+S
Subjt:  KKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS

Query:  FDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FDAFKVPRDFYRCG FKKCSWLV EDGFYFSPDEVNWKKDFQW
Subjt:  FDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_038875011.1 S-protein homolog 5-like [Benincasa hispida]9.3e-7491.03Show/hide
Query:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK KK+LSTI+ LF  +AFSFFMFIIQPD+LYL+GVVFEVRVINGFKNNSSLPLVIWCSS+ESDLGGRALQEHDDFSWKVTTKLWK  +FSCTMKWDAKR
Subjt:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_038875976.1 S-protein homolog 5-like isoform X1 [Benincasa hispida]3.8e-7593.1Show/hide
Query:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK+LSTIL LF  S+FSFFMFII PD+ YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_038875977.1 S-protein homolog 5-like isoform X2 [Benincasa hispida]5.5e-7493.06Show/hide
Query:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK+LSTIL LF  S+FSFFMFII PD+ YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQ
        RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQ
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNI8 S-protein homolog2.4e-6795.93Show/hide
Query:  MFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCS
        MFIIQPD+LYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCG+FKKCS
Subjt:  MFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEVNWKKDFQW
        WLVTEDGFYFS DE+NWKKDFQW
Subjt:  WLVTEDGFYFSPDEVNWKKDFQW

A0A1S4E2Y6 S-protein homolog2.4e-7591.72Show/hide
Query:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK L TIL LF  SAFSF +FI+QPD+LYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        +SFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDE+NWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

A0A5D3CZS1 S-protein homolog2.4e-7591.72Show/hide
Query:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK L TIL LF  SAFSF +FI+QPD+LYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        +SFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDE+NWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

A0A6J1HNC1 S-protein homolog8.8e-7086.71Show/hide
Query:  KKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS
        KKK+L+ IL L  +SAFSFF+FIIQPD+LYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+S
Subjt:  KKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS

Query:  FDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FDAFKVPRDFYRCG FKKCSWLV EDGFYFSPDEVNWKKDFQW
Subjt:  FDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

A0A6J1KN10 S-protein homolog2.3e-7087.41Show/hide
Query:  KKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS
        KKK+L+TIL L  +SAFSFF+FIIQPD+LYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+S
Subjt:  KKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS

Query:  FDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FDAFKVPRDFYRCG FKKCSWLV EDGFYFSPDEVNWKKDFQW
Subjt:  FDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 27.3e-0528.92Show/hide
Query:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVTEDG
        + L L+  C SK+ DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C +  +C W +  +G
Subjt:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVTEDG

Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family6.6e-0931.65Show/hide
Query:  LVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGNFKKCSWLVTEDG
        LV+ C +K  DLG  AL+  +   ++    L ++  ++CT  W    ++FD F+V RD      CG  ++C W + E G
Subjt:  LVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGNFKKCSWLVTEDG

AT3G24060.1 Plant self-incompatibility protein S1 family3.1e-4360Show/hide
Query:  ILFLFLLSAFS---FFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRRSFDA
        IL LF+L A S    F  ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     LW    +++CTMKWD+KR+ F+A
Subjt:  ILFLFLLSAFS---FFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRRSFDA

Query:  FKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FKV RD  RCG+ KKCSW V EDGFYFS DEV W KDF W
Subjt:  FKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW

AT4G16195.1 Plant self-incompatibility protein S1 family5.2e-0628.92Show/hide
Query:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVTEDG
        + L L+  C SK+ DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C +  +C W +  +G
Subjt:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVTEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAAAAACTTCTAAGCACCATCCTGTTCCTCTTCCTCCTCTCAGCATTCTCCTTCTTCATGTTCATCATACAGCCAGATAAATTATACCTACACGGTGTAGT
TTTCGAGGTTCGAGTCATCAATGGTTTCAAAAACAACTCGTCTTTGCCTTTGGTCATATGGTGCTCCTCAAAAGAGAGTGATTTGGGAGGGAGGGCGTTGCAAGAGCACG
ATGATTTCAGCTGGAAAGTAACAACAAAGTTGTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGGTCCTTTGATGCGTTTAAGGTTCCTAGG
GACTTCTACCGATGTGGGAATTTCAAAAAGTGCTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
TGCACATAAGATTTCTCCCTATAAATACTCAAATAAAAGTACTGAACTCCCCTAAAAAAATCATCTCCCCCTTTGGCCAAATTTTCTCCATCCCCAAATGAAGAAGAAAA
AACTTCTAAGCACCATCCTGTTCCTCTTCCTCCTCTCAGCATTCTCCTTCTTCATGTTCATCATACAGCCAGATAAATTATACCTACACGGTGTAGTTTTCGAGGTTCGA
GTCATCAATGGTTTCAAAAACAACTCGTCTTTGCCTTTGGTCATATGGTGCTCCTCAAAAGAGAGTGATTTGGGAGGGAGGGCGTTGCAAGAGCACGATGATTTCAGCTG
GAAAGTAACAACAAAGTTGTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGGTCCTTTGATGCGTTTAAGGTTCCTAGGGACTTCTACCGAT
GTGGGAATTTCAAAAAGTGCTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGATCAAAACGCACACAG
TTTTTGTAAATTATTTTTCTTTACTTTAATAATATGTTGACCGACGATTCAAAGAACCTCATACACTTGATCGACATATTTTATGTTAGTTGGGTTACGTTCATGGTTGT
TCTGACAAATAAGCTTTTTGTCTAGAAGGTTTTATGTTACATATCCCTTGTTGTTTTGGTTTTGATGCATTTTTGTTCATTTTGTAGGCTTCTTTCCTTCTGATCTTCCA
GATGAAATGAAAAGATGAGTAATGAACATGAATTTACTCTATTTTGCTTTTTTTAGTA
Protein sequenceShow/hide protein sequence
MKKKKLLSTILFLFLLSAFSFFMFIIQPDKLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPR
DFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW