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Clc06G08090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:9042184..9044078
RNA-Seq ExpressionClc06G08090
SyntenyClc06G08090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON63791.1 hypothetical protein PanWU01x14_129470 [Parasponia andersonii]4.4e-2050.72Show/hide
Query:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFI--SSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA
        S+L  + KLS F    LA + S  A   +AF+  ++ P  S+SKK++E +DAC K KEAAE+VK  AKEVRET +F+RDTV +TAK VSK+TKE TEKV+
Subjt:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFI--SSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA

Query:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF
        +       TA++I +KAK +V+GALG A+  T+++KDF
Subjt:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF

PON66099.1 hypothetical protein TorRG33x02_269090 [Trema orientale]2.8e-1950Show/hide
Query:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADT
        S+LK + KLS F    +++S S       A  ++ P  S+SKK++E +DAC K KEAAE+VK  AKEVRET +F+RDTV +TAK VSK+TK+ TEKV++ 
Subjt:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADT

Query:  AEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF
              TAE+I +KAK +V+GALG A+  T+++KDF
Subjt:  AEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF

RXH78485.1 hypothetical protein DVH24_002003 [Malus domestica]6.3e-1949.29Show/hide
Query:  MSTLKHTAKLSNFFKFQLAKSNSNG----ALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTE
        MS++K   KLS +    L K+ +N     +L  + F+       +SKK+++  DAC KTKEAA++VK+ AKEVR+T +F+RDTV +TAK ++KM KE TE
Subjt:  MSTLKHTAKLSNFFKFQLAKSNSNG----ALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTE

Query:  KVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD
        KV       T+TAE +T K K TV+GA G AKNTTEIIKD
Subjt:  KVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD

XP_015887495.1 uncharacterized protein LOC107422546 [Ziziphus jujuba]2.1e-2256.93Show/hide
Query:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYP-TLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA
        MSTLK TAK+S FF     K NSN     KA +++    L   KKD++  D C KTKEAAE+V++ AKEVRET +F+RDTV +TAK V+KMTKE T+KV+
Subjt:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYP-TLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA

Query:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD
        +       TA N TEKAK TV+GALG AKN TEIIKD
Subjt:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD

XP_022138632.1 uncharacterized protein LOC111009748 [Momordica charantia]1.8e-4579.43Show/hide
Query:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA
        MSTLKHTAKLS +    L    SN + G KAFISSYPTLSKSK  DEETVDAC+KTKEAAE+VKE A+EVRET++FL+DTVASTAKCVSKMTKEVT KV+
Subjt:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA

Query:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFIDK
        +TAEKITKTAENITEKAKDTV+GA GTAKNTT IIKDFIDK
Subjt:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFIDK

TrEMBL top hitse value%identityAlignment
A0A2P5CRY2 Uncharacterized protein2.1e-2050.72Show/hide
Query:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFI--SSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA
        S+L  + KLS F    LA + S  A   +AF+  ++ P  S+SKK++E +DAC K KEAAE+VK  AKEVRET +F+RDTV +TAK VSK+TKE TEKV+
Subjt:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFI--SSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA

Query:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF
        +       TA++I +KAK +V+GALG A+  T+++KDF
Subjt:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF

A0A2P5CYH7 Uncharacterized protein1.4e-1950Show/hide
Query:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADT
        S+LK + KLS F    +++S S       A  ++ P  S+SKK++E +DAC K KEAAE+VK  AKEVRET +F+RDTV +TAK VSK+TK+ TEKV++ 
Subjt:  STLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADT

Query:  AEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF
              TAE+I +KAK +V+GALG A+  T+++KDF
Subjt:  AEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDF

A0A498I8V5 Uncharacterized protein3.1e-1949.29Show/hide
Query:  MSTLKHTAKLSNFFKFQLAKSNSNG----ALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTE
        MS++K   KLS +    L K+ +N     +L  + F+       +SKK+++  DAC KTKEAA++VK+ AKEVR+T +F+RDTV +TAK ++KM KE TE
Subjt:  MSTLKHTAKLSNFFKFQLAKSNSNG----ALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTE

Query:  KVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD
        KV       T+TAE +T K K TV+GA G AKNTTEIIKD
Subjt:  KVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD

A0A6J1CBN9 uncharacterized protein LOC1110097488.6e-4679.43Show/hide
Query:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA
        MSTLKHTAKLS +    L    SN + G KAFISSYPTLSKSK  DEETVDAC+KTKEAAE+VKE A+EVRET++FL+DTVASTAKCVSKMTKEVT KV+
Subjt:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA

Query:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFIDK
        +TAEKITKTAENITEKAKDTV+GA GTAKNTT IIKDFIDK
Subjt:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFIDK

A0A6P4A219 uncharacterized protein LOC1074225461.0e-2256.93Show/hide
Query:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYP-TLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA
        MSTLK TAK+S FF     K NSN     KA +++    L   KKD++  D C KTKEAAE+V++ AKEVRET +F+RDTV +TAK V+KMTKE T+KV+
Subjt:  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYP-TLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVA

Query:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD
        +       TA N TEKAK TV+GALG AKN TEIIKD
Subjt:  DTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04670.1 unknown protein1.3e-1750.46Show/hide
Query:  KAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDTVTGALGTAKN
        + F+S+ P   + K++ E    C K KEAAE+VKE AK+V+ETT++++D  ++TA  V+KMTK+VTEKV       T+T + ITEKAK +V+G LGTAKN
Subjt:  KAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDTVTGALGTAKN

Query:  TTEIIKDFI
         T+IIK+ I
Subjt:  TTEIIKDFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCC
TACACTTTCAAAATCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTA
AATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAA
AACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAACCTTCCTTTTAAAACATACATCTTGAACAACATCAAAATTTGTAACTTCTTTCTTGTCTTTGGAAAACAAGAAAACAGAAGAATGTCAACTTTGAAACACACCGC
AAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAATCAAAGAAGG
ATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCT
TCCACTGCCAAATGTGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGA
TACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAACCCTTTTCATTATTCTTCTTTTCATATCTATCCACCTCTC
TTAATCTCAATAAGAAAAAATACTAGTTATAGCCTACTTCTTATTTTTAATTTAATTTAAAT
Protein sequenceShow/hide protein sequence
MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAE
NITEKAKDTVTGALGTAKNTTEIIKDFIDK