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Clc06G08200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncytochrome b5-like
Genome locationClcChr06:9424836..9426300
RNA-Seq ExpressionClc06G08200
SyntenyClc06G08200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138957.1 cytochrome b5 [Cucumis sativus]7.7e-4688.57Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE MSKYY+GE+D+ST+ ER  YT PKQPHYN+DKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

XP_008457249.1 PREDICTED: cytochrome b5-like [Cucumis melo]2.0e-4690.48Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGE+D+STI E+  YT PKQPHYN+DKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

XP_022959033.1 cytochrome b5-like [Cucurbita moschata]3.8e-4586.67Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE M+KYY+G++D+STI ER  YT  KQPHYN+DKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

XP_023006481.1 cytochrome b5-like [Cucurbita maxima]1.7e-4587.62Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE M+KYY+GE+D+STI ER  YT  KQPHYN+DKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

XP_038906915.1 cytochrome b5-like [Benincasa hispida]6.9e-4791.43Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKY +GE+D+STI ERS YTT KQPHYN+DKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

TrEMBL top hitse value%identityAlignment
A0A0A0LHS9 Cytochrome b5 heme-binding domain-containing protein3.7e-4688.57Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE MSKYY+GE+D+ST+ ER  YT PKQPHYN+DKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

A0A1S3C5R9 cytochrome b5-like9.8e-4790.48Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGE+D+STI E+  YT PKQPHYN+DKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

A0A5D3CSF5 Cytochrome b5-like9.8e-4790.48Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGE+D+STI E+  YT PKQPHYN+DKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

A0A6J1H4S5 cytochrome b5-like1.8e-4586.67Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE M+KYY+G++D+STI ER  YT  KQPHYN+DKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

A0A6J1KXV9 cytochrome b5-like8.3e-4687.62Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE M+KYY+GE+D+STI ER  YT  KQPHYN+DKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

SwissProt top hitse value%identityAlignment
O04354 Cytochrome b53.6e-3863.71Show/hide
Query:  AESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIK
        AE A   + K+    I   VY+VT+FLEDHPGGD+VLLS TGKDATDDFED+GHS SA+ M+ +YY+G++D S+I  +  YT PKQP YN DKT EF+IK
Subjt:  AESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIK

Query:  LLQFLVPLAILGLAVGIRFYTKST
        LLQFLVPL IL  A+GIRFYTKS+
Subjt:  LLQFLVPLAILGLAVGIRFYTKST

O48845 Cytochrome b5 isoform B8.8e-4582.69Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVT+FLEDHPGGD+VLLS TGKDATDDFEDVGHSESAREMM +YY+GE+D +TI ++  YT PKQPHYN+DKT+EFIIKLLQFLVPLAILGLAVGIR 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKS
        YTKS
Subjt:  YTKS

P49098 Cytochrome b51.3e-4063.71Show/hide
Query:  AESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIK
        AE +   + K+    I   VY+VT+FL+DHPGGDEVLLS TGKDATDDFEDVGHS SAR M+ +YY+G++D +TI  ++ YT P QPHYN+DKT+EF++K
Subjt:  AESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIK

Query:  LLQFLVPLAILGLAVGIRFYTKST
        LLQFLVPL ILG+A GIRFYTK +
Subjt:  LLQFLVPLAILGLAVGIRFYTKST

P49099 Cytochrome b5, seed isoform4.5e-4165.32Show/hide
Query:  AESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIK
        AE ++  + K+    I   VYNVT+FLEDHPGG EVLLS TGKDATDDFED+GHS SAR M+ +YY+G++D STI  +  YT PKQPHYN+DKTTEFI+K
Subjt:  AESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIK

Query:  LLQFLVPLAILGLAVGIRFYTKST
        LLQFLVPL ILG+A G+ FYTK +
Subjt:  LLQFLVPLAILGLAVGIRFYTKST

P49100 Cytochrome b51.6e-4176.92Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNV++FLEDHPGGD+VLLS TGKDATDDFEDVGHS +AR MM +YY+G++D STI  R+ Y  PKQPHYN+DKT EFIIK+LQFLVPLAILGLAV IR 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKS
        YTKS
Subjt:  YTKS

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A2.2e-1943.69Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQ-----FLVPLAILGLA
        VY+V+ ++++HPGGD+VLL+  GKDATDDFED GHS+ ARE+M KY+IGE+D S++ E      P+   Y +D+  + + KL       ++VP++I+ ++
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQ-----FLVPLAILGLA

Query:  VGI
        V +
Subjt:  VGI

AT2G32720.1 cytochrome B5 isoform B6.2e-4682.69Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVT+FLEDHPGGD+VLLS TGKDATDDFEDVGHSESAREMM +YY+GE+D +TI ++  YT PKQPHYN+DKT+EFIIKLLQFLVPLAILGLAVGIR 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKS
        YTKS
Subjt:  YTKS

AT2G46650.1 cytochrome B5 isoform C1.1e-2149.51Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTT--EFIIKLLQFLVPLAILGLAVGI
        VY+++ F+++HPGGD VLL+ TGKDA+ DFEDV HS+ A+E+M KY IG++D ST+     Y  P +      +TT  E   KLL +L+PL ILG+A  +
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTT--EFIIKLLQFLVPLAILGLAVGI

Query:  RFY
        RFY
Subjt:  RFY

AT5G48810.1 cytochrome B5 isoform D6.1e-3353.54Show/hide
Query:  MSAESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPH--YNEDKTTE
        +S  S HS   K+    I   VY+VT+FL+DHPGGDEV+L+ TGKDATDDFEDVGHS +A+ M+ +YY+G++D +T+  ++ +  P        +DK+++
Subjt:  MSAESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPH--YNEDKTTE

Query:  FIIKLLQFLVPLAILGLAVGIRFYTKS
        F+IKLLQFLVPL ILGLA GIR+YTK+
Subjt:  FIIKLLQFLVPLAILGLAVGIRFYTKS

AT5G53560.1 cytochrome B5 isoform E3.1e-3767.96Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VY+VT F++DHPGGDEVLLS TGKDAT+DFEDVGHS++AR+MM KY+IGE+D S++     Y  P+QP YN+DKT EFIIK+LQFLVP+ ILGLA+ +R 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTK
        YTK
Subjt:  YTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTGTTTACTGAGGGCACTCTAATGTCTGCTGAATCTGCACATTCCATTGATGTTAAAAATCTGTTGCCAGCCATCATACTTATGGTTTACAATGTAACCGAGTT
CTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGA
GCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCAGAACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATC
AAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTGTTTACTGAGGGCACTCTAATGTCTGCTGAATCTGCACATTCCATTGATGTTAAAAATCTGTTGCCAGCCATCATACTTATGGTTTACAATGTAACCGAGTT
CTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGA
GCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCAGAACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATC
AAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGAGGAGGTTCTTGTTGAGATATTTAGATGGTTTA
GTGTTAATGATCGATTATCAACTGCTGCATTGTGTTTAATTTGTGAAACTTAGTAATTTTCTAGTCTGATGCTCTACCTTTTTTTTTCTTCCTTTTACTCTGTCTCTTAC
ATTGTAGTTCAGCTATCTGACTGGTAAACTAAATGTTATTTTAGTTAAAGAAAAAGGGTT
Protein sequenceShow/hide protein sequence
MLLFTEGTLMSAESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFII
KLLQFLVPLAILGLAVGIRFYTKST