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Clc06G08230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUlp1-like peptidase
Genome locationClcChr06:9465309..9466750
RNA-Seq ExpressionClc06G08230
SyntenyClc06G08230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068109.1 Ulp1-like peptidase [Cucumis melo var. makuwa]3.0e-0537.89Show/hide
Query:  MSSFKGALNGKVSLYKKKSASL--ESYSLYQFPFAFET--------------------RINAIDPTNEKQAYLSRTLDLPISNGYVAPAPPPLEN
        + S K AL GKV+++KKK  +   ESYSLY FPF F+T                    RI AI+P +E+  YL + LD+P + GY      PL++
Subjt:  MSSFKGALNGKVSLYKKKSASL--ESYSLYQFPFAFET--------------------RINAIDPTNEKQAYLSRTLDLPISNGYVAPAPPPLEN
TYK11124.1 hypothetical protein E5676_scaffold66G00300 [Cucumis melo var. makuwa]2.1e-0649.32Show/hide
Query:  SFKGALNGKVSLYKKKSA---SLESYSLYQFPFAFETRINA---------IDPTNEKQAYLSRTLDLPISNGY
        S KG L GK++L+K K +   SLESYSLY F FAF+  I +         I+PTNEK A+L+R LD+P + GY
Subjt:  SFKGALNGKVSLYKKKSA---SLESYSLYQFPFAFETRINA---------IDPTNEKQAYLSRTLDLPISNGY
TrEMBL top hitse value%identityAlignment
A0A5D3CIW7 Uncharacterized protein1.0e-0649.32Show/hide
Query:  SFKGALNGKVSLYKKKSA---SLESYSLYQFPFAFETRINA---------IDPTNEKQAYLSRTLDLPISNGY
        S KG L GK++L+K K +   SLESYSLY F FAF+  I +         I+PTNEK A+L+R LD+P + GY
Subjt:  SFKGALNGKVSLYKKKSA---SLESYSLYQFPFAFETRINA---------IDPTNEKQAYLSRTLDLPISNGY
A0A5D3DRB7 Ulp1-like peptidase1.4e-0537.89Show/hide
Query:  MSSFKGALNGKVSLYKKKSASL--ESYSLYQFPFAFET--------------------RINAIDPTNEKQAYLSRTLDLPISNGYVAPAPPPLEN
        + S K AL GKV+++KKK  +   ESYSLY FPF F+T                    RI AI+P +E+  YL + LD+P + GY      PL++
Subjt:  MSSFKGALNGKVSLYKKKSASL--ESYSLYQFPFAFET--------------------RINAIDPTNEKQAYLSRTLDLPISNGYVAPAPPPLEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGCTTCAAGGGTGCACTTAATGGGAAAGTGTCACTGTACAAAAAGAAGTCTGCATCACTCGAGTCATACAGCTTATATCAATTTCCTTTTGCTTTTGAGACTCG
TATAAATGCCATCGATCCGACTAATGAAAAGCAGGCCTACTTGAGTCGTACGTTAGACCTTCCAATTTCAAATGGGTATGTAGCACCTGCCCCTCCTCCACTAGAGAACA
TTGTTCGTGATACACGGTTGGGTGATGAGAGTGAGGAACGAGGGATTGGTGAAGATACACCACGTGTGAGTGCAATCAACATTTACAACATTTGGAGTCAGTATTATGGT
GTTGGAGAAGGCCCGTCGTTTCAAGAACCAGTTGCTCAAGATCAACCTGTTGACAATCCACCTATTGACGAGCACACACGGTTTCTCGATCCACCTATTCCTAATGATAC
TCTTGTTGTTGATCCCATAGACAAGGACTCGGATGATGGAGAAGGCGTCGTCCCCATAAATGTATCATTGGGAGGCAAAGATACGATTGGTCCATCAGATGTTCCATTGA
AGAAGCCGAAGGACGAGTCTCTGGAAGTGGTTTGTAAGAAAATGCCTACGAGAAAGAGGAGGGCACCAAGGAAGCTCCGTAGTCCAATGATGGATCAACCAGTAAGGAGA
AGGAGGAAGATGTTGAACTGGTATGGCAACCCTAGAGGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGCTTCAAGGGTGCACTTAATGGGAAAGTGTCACTGTACAAAAAGAAGTCTGCATCACTCGAGTCATACAGCTTATATCAATTTCCTTTTGCTTTTGAGACTCG
TATAAATGCCATCGATCCGACTAATGAAAAGCAGGCCTACTTGAGTCGTACGTTAGACCTTCCAATTTCAAATGGGTATGTAGCACCTGCCCCTCCTCCACTAGAGAACA
TTGTTCGTGATACACGGTTGGGTGATGAGAGTGAGGAACGAGGGATTGGTGAAGATACACCACGTGTGAGTGCAATCAACATTTACAACATTTGGAGTCAGTATTATGGT
GTTGGAGAAGGCCCGTCGTTTCAAGAACCAGTTGCTCAAGATCAACCTGTTGACAATCCACCTATTGACGAGCACACACGGTTTCTCGATCCACCTATTCCTAATGATAC
TCTTGTTGTTGATCCCATAGACAAGGACTCGGATGATGGAGAAGGCGTCGTCCCCATAAATGTATCATTGGGAGGCAAAGATACGATTGGTCCATCAGATGTTCCATTGA
AGAAGCCGAAGGACGAGTCTCTGGAAGTGGTTTGTAAGAAAATGCCTACGAGAAAGAGGAGGGCACCAAGGAAGCTCCGTAGTCCAATGATGGATCAACCAGTAAGGAGA
AGGAGGAAGATGTTGAACTGGTATGGCAACCCTAGAGGGGGGTGA
Protein sequenceShow/hide protein sequence
MSSFKGALNGKVSLYKKKSASLESYSLYQFPFAFETRINAIDPTNEKQAYLSRTLDLPISNGYVAPAPPPLENIVRDTRLGDESEERGIGEDTPRVSAINIYNIWSQYYG
VGEGPSFQEPVAQDQPVDNPPIDEHTRFLDPPIPNDTLVVDPIDKDSDDGEGVVPINVSLGGKDTIGPSDVPLKKPKDESLEVVCKKMPTRKRRAPRKLRSPMMDQPVRR
RRKMLNWYGNPRGG