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Clc06G08365 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08365
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 3
Genome locationClcChr06:9650083..9656678
RNA-Seq ExpressionClc06G08365
SyntenyClc06G08365
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651770.1 hypothetical protein Csa_006265 [Cucumis sativus]9.7e-2477.38Show/hide
Query:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + +AGGAITPSPPAN SPTITVP T TP+FNNGGT D NGLNP YNPTSTS P NS+ASLS TT KL++LILFSIAISLP QT+
Subjt:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

XP_004138961.2 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]9.7e-2477.38Show/hide
Query:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + +AGGAITPSPPAN SPTITVP T TP+FNNGGT D NGLNP YNPTSTS P NS+ASLS TT KL++LILFSIAISLP QT+
Subjt:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

XP_008457240.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo]4.6e-2680.95Show/hide
Query:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + +AGGAITPSPPANTSPTITVP T TPSFNNGGTGD NG+NPVYNPTSTS P NS+AS SFTT KL++LILFSIAISLP QT+
Subjt:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

XP_022959424.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata]2.5e-1977.01Show/hide
Query:  MDAAGGAITPSPPANTS--PTITVPA-TTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + AAGGAITPSPPANTS  PTITVPA TTTPSFNNG TGDMNGL+PVYNP STSTP NSKAS SF   KL    LFSIAISL S T+
Subjt:  MDAAGGAITPSPPANTS--PTITVPA-TTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

XP_038875835.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida]7.9e-2687.34Show/hide
Query:  AAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPS
        AAGGAITPSPP NTSPTITVPATTTPSFNNGGT D NGLNPVYNPTSTS+P NS+AS SFT  KLLVL+LFSIAISLPS
Subjt:  AAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPS

TrEMBL top hitse value%identityAlignment
A0A0A0LND4 X8 domain-containing protein4.7e-2477.38Show/hide
Query:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + +AGGAITPSPPAN SPTITVP T TP+FNNGGT D NGLNP YNPTSTS P NS+ASLS TT KL++LILFSIAISLP QT+
Subjt:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

A0A1S3C4M3 PLASMODESMATA CALLOSE-BINDING PROTEIN 32.2e-2680.95Show/hide
Query:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + +AGGAITPSPPANTSPTITVP T TPSFNNGGTGD NG+NPVYNPTSTS P NS+AS SFTT KL++LILFSIAISLP QT+
Subjt:  MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

A0A6J1H812 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like1.2e-1977.01Show/hide
Query:  MDAAGGAITPSPPANTS--PTITVPA-TTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + AAGGAITPSPPANTS  PTITVPA TTTPSFNNG TGDMNGL+PVYNP STSTP NSKAS SF   KL    LFSIAISL S T+
Subjt:  MDAAGGAITPSPPANTS--PTITVPA-TTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

A0A6J1HKA9 PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like6.5e-1874.7Show/hide
Query:  MDAAGGAITPSPPANTSPTITVPAT--TTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPS
        +  AGGAITPS P NTSPTIT P T  TTPSFNNGGT D NGLNPVYNPTST    N+KAS S TTSKLL+LIL SIAISL S
Subjt:  MDAAGGAITPSPPANTSPTITVPAT--TTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPS

A0A6J1KVB1 PLASMODESMATA CALLOSE-BINDING PROTEIN 32.9e-1873.56Show/hide
Query:  MDAAGGAITPSPPANTS--PTITVPA-TTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI
        + AAGGAITPSPPANTS  PTITVPA TTTPSFNNG +GD+NGL+PVYNP STSTP NSKAS SF   K     LFSIAISL S T+
Subjt:  MDAAGGAITPSPPANTS--PTITVPA-TTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTGCAGGAGGAGCAATCACACCCAGCCCTCCGGCAAACACAAGCCCAACAATAACAGTGCCAGCTACAACCACACCAAGCTTCAACAATGGCGGTACCGGTGA
CATGAATGGACTAAATCCGGTATATAATCCAACATCAACCTCGACTCCAAACAACTCAAAAGCCTCTTTGAGTTTTACGACCTCGAAACTCTTAGTCTTAATCTTGTTTT
CAATTGCTATCTCACTGCCTTCACAAACAATATGGGGGGGTGGGAATGTGCAGAGGGTTTATTCAGTTTTGTTAGAAATGGTGAGGCTTCCAAAGAGAGTAGAATTTGAA
TTTCAAACCACAGGCTGCTTGAATTTTCCTTCAGCTGGGCCTGATGTGAAATTGAATGCACAGAAGCCACCCATGTATTCATCAGGTGTCGAGGCTGGGTCTGGACAGTT
TCCGGGTTCATCAGCATGTTCAATTGCCATTTTCTCTCGGTTACCTCCGTCGCCTACTGTTATATGGACAGGACCACAACGATCCAAAGCAGTGAAGGACGGAGTTAGGG
AATGGGTGAGTGAATTAGGACTTGGGAGAGATCTCAAGAGGGCGGGTGCAAGCACCAAGCATTATAAAATGAATGCCACCTGCATTGAAAGAGTAGTAAAATATCGAAGA
CGAGTTACTCTCTTTGGATGGGAATGCAAATCGGGAACTATAAGCTGCAAATGTTTGATTTTCAGCTTGCTCCAATCCTGTCAGAAAACAATAAGAGAGCTCCAGAAATC
GTCTAATGCACAAAACCAGTTTGAGCAAGCAAAAGCATCTTCAACCGAGCAATTAGGCAAACAAACAAGCAAGTACACAACTAAATTAGCCATATTCGAAACGATCAACA
AGAATTATTTGAAGAACCTGTTATCCAAGAAATCCAAGCGGAGTCATAATCTGCAGAGAGAGAGACAGAAATCTGTTCCGGCGCGAACTGACCCCCATTTTTCTGAACTC
TCGGATCAGTTTCCGGCAAGTCCTCAGCCAAGCCCCGGAAGCTCTTATCAAGCGGGACAGTCACAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTGCAGGAGGAGCAATCACACCCAGCCCTCCGGCAAACACAAGCCCAACAATAACAGTGCCAGCTACAACCACACCAAGCTTCAACAATGGCGGTACCGGTGA
CATGAATGGACTAAATCCGGTATATAATCCAACATCAACCTCGACTCCAAACAACTCAAAAGCCTCTTTGAGTTTTACGACCTCGAAACTCTTAGTCTTAATCTTGTTTT
CAATTGCTATCTCACTGCCTTCACAAACAATATGGGGGGGTGGGAATGTGCAGAGGGTTTATTCAGTTTTGTTAGAAATGGTGAGGCTTCCAAAGAGAGTAGAATTTGAA
TTTCAAACCACAGGCTGCTTGAATTTTCCTTCAGCTGGGCCTGATGTGAAATTGAATGCACAGAAGCCACCCATGTATTCATCAGGTGTCGAGGCTGGGTCTGGACAGTT
TCCGGGTTCATCAGCATGTTCAATTGCCATTTTCTCTCGGTTACCTCCGTCGCCTACTGTTATATGGACAGGACCACAACGATCCAAAGCAGTGAAGGACGGAGTTAGGG
AATGGGTGAGTGAATTAGGACTTGGGAGAGATCTCAAGAGGGCGGGTGCAAGCACCAAGCATTATAAAATGAATGCCACCTGCATTGAAAGAGTAGTAAAATATCGAAGA
CGAGTTACTCTCTTTGGATGGGAATGCAAATCGGGAACTATAAGCTGCAAATGTTTGATTTTCAGCTTGCTCCAATCCTGTCAGAAAACAATAAGAGAGCTCCAGAAATC
GTCTAATGCACAAAACCAGTTTGAGCAAGCAAAAGCATCTTCAACCGAGCAATTAGGCAAACAAACAAGCAAGTACACAACTAAATTAGCCATATTCGAAACGATCAACA
AGAATTATTTGAAGAACCTGTTATCCAAGAAATCCAAGCGGAGTCATAATCTGCAGAGAGAGAGACAGAAATCTGTTCCGGCGCGAACTGACCCCCATTTTTCTGAACTC
TCGGATCAGTTTCCGGCAAGTCCTCAGCCAAGCCCCGGAAGCTCTTATCAAGCGGGACAGTCACAGGCTTAA
Protein sequenceShow/hide protein sequence
MDAAGGAITPSPPANTSPTITVPATTTPSFNNGGTGDMNGLNPVYNPTSTSTPNNSKASLSFTTSKLLVLILFSIAISLPSQTIWGGGNVQRVYSVLLEMVRLPKRVEFE
FQTTGCLNFPSAGPDVKLNAQKPPMYSSGVEAGSGQFPGSSACSIAIFSRLPPSPTVIWTGPQRSKAVKDGVREWVSELGLGRDLKRAGASTKHYKMNATCIERVVKYRR
RVTLFGWECKSGTISCKCLIFSLLQSCQKTIRELQKSSNAQNQFEQAKASSTEQLGKQTSKYTTKLAIFETINKNYLKNLLSKKSKRSHNLQRERQKSVPARTDPHFSEL
SDQFPASPQPSPGSSYQAGQSQA