CuGenDBv2

Gene ID	Clc06G08465
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Integrase catalytic domain-containing protein
Genome location	ClcChr06:9831547..9832120
RNA-Seq Expression	Clc06G08465
Synteny	Clc06G08465
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0030154 - cell differentiation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR044987 - Uncharacterized mitochondrial protein AtMg00030-like

Homology

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GenBank top hits

e value

%identity

Alignment

DAD25653.1 TPA_asm: hypothetical protein HUJ06_027117 [Nelumbo nucifera]

1.4e-14

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

GEV66759.1 ATP synthase F1 subunit 1, mitochondrial [Tanacetum cinerariifolium]

9.9e-16

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGFSIEDPW+TD ISPWPFAS+SV PS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

GEX84108.1 putative mitochondrial protein [Tanacetum cinerariifolium]

9.9e-16

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGFSIEDPW+TD ISPWPFAS+SV PS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

KAD4384359.1 hypothetical protein E3N88_24527 [Mikania micrantha]

1.4e-14

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

TXG46219.1 hypothetical protein EZV62_028250 [Acer yangbiense]

1.4e-14

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

TrEMBL top hits

e value

%identity

Alignment

A0A5C7GP19 Uncharacterized protein

6.9e-15

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

A0A5N6N240 Integrase catalytic domain-containing protein

6.9e-15

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

A0A5N6NAN1 Uncharacterized protein

6.9e-15

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

A0A6S7KR95 Uncharacterized protein

6.9e-15

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

A0A6S7M0D1 Uncharacterized protein

6.9e-15

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Query:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        ATQ FQFAKFEKSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  ATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

SwissProt top hits

e value

%identity

Alignment

P93276 Uncharacterized mitochondrial protein AtMg00030

1.3e-15

82.61

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Query:  FQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        FQFAKF KSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  FQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

Arabidopsis top hits

e value

%identity

Alignment

ATMG00030.1 hypothetical protein

9.6e-17

82.61

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Query:  FQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS
        FQFAKF KSKERRLAT+L YGF I DPW+TD ISPWPFAS+SVLPS
Subjt:  FQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

Sequences

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CDS sequence

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ATGGCAAGGACGAGGGCAGGGACGAGGGCGGGGACGAGGAATCCCTACCCACCTCACCCCGCCCGATTACCAACCCTAATCAGAAGTGATCAGAGTTATAAATGTACTCC
TTGTAAAGAACTCAAACGAGAAAATGCTACTCAAAATTTTCAATTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGAAGCTTAGATACGGTTTCTCGATCG
AAGATCCATGGCTCACAGACAATATCTCCCCATGGCCTTTCGCCTCTAAAAGTGTCCTTCCTTCTTAA

mRNA sequence

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Protein sequence

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MARTRAGTRAGTRNPYPPHPARLPTLIRSDQSYKCTPCKELKRENATQNFQFAKFEKSKERRLATKLRYGFSIEDPWLTDNISPWPFASKSVLPS

Clc06G08465 (gene) of Watermelon (cordophanus) v2 genome