; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G08535 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08535
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRegulator of rDNA transcription protein 15
Genome locationClcChr06:10056214..10056456
RNA-Seq ExpressionClc06G08535
SyntenyClc06G08535
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD26579.1 cytochrome P450 like_TBP [Citrullus lanatus]1.5e-36100Show/hide
Query:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

KAA0053171.1 putative senescence-associated protein [Cucumis melo var. makuwa]1.5e-36100Show/hide
Query:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

XP_022973211.1 uncharacterized protein LOC111471770, partial [Cucurbita maxima]2.8e-3598.73Show/hide
Query:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        SKKRGSAPLP HGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

XP_022975662.1 uncharacterized protein LOC111475501 [Cucurbita maxima]2.8e-3598.73Show/hide
Query:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        SKKRGSAPLP HGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

XP_023520624.1 uncharacterized protein LOC111784035 [Cucurbita pepo subsp. pepo]2.8e-3598.73Show/hide
Query:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        SKKRGSAPLP HGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

TrEMBL top hitse value%identityAlignment
A0A5A7UI06 Putative senescence-associated protein7.1e-37100Show/hide
Query:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

A0A6J1IDC9 uncharacterized protein LOC1114717701.3e-3598.73Show/hide
Query:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        SKKRGSAPLP HGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

A0A6J1ILD9 uncharacterized protein LOC1114757451.3e-3598.73Show/hide
Query:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        SKKRGSAPLP HGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

Q6I666 Cytochrome P450 like_TBP7.1e-37100Show/hide
Query:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

R7VLB1 Uncharacterized protein (Fragment)1.3e-3598.73Show/hide
Query:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
        SKKRGSAPLP HGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR
Subjt:  SKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAAAAGAGGGGCAGTGCCCCGCTTCCGTTTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACC
TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGAC
AGGGACAGTGGGAATCTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAAAAGAGGGGCAGTGCCCCGCTTCCGTTTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACC
TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGAC
AGGGACAGTGGGAATCTCGTTAA
Protein sequenceShow/hide protein sequence
MSKKRGSAPLPFHGISKITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR