; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G08700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G08700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:10413246..10414658
RNA-Seq ExpressionClc06G08700
SyntenyClc06G08700
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026101.1 hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3857.99Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARI IISGL+FLC+++GGFLLCLYLF+PES++ DWY +VGI+LVSTPW+FW LVYL+HCLKP +VQ NA  + +++SS+N+  +  N  GG  
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVES-----PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
           NL +VES     PG GKRRVHFGAVVV G +PQ  +  SH+S SK+      + NE    S TSSS
Subjt:  TEGNLGEVES-----PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

XP_004138999.1 uncharacterized protein LOC101203715 [Cucumis sativus]1.0e-5272.56Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARI IISGLIFLCII GGFLLCLYLFLPESQT DWYP +GIVLVSTPWIFWL VY++HCLKPTKV LN  GSN+ NSS+ KTEA+ NN     
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
         E ++G+ E+PGGGKR+VHFGAV VM KQP LDRN SH   SKQ T+ +P+E E+PLR STSSS
Subjt:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

XP_022155761.1 uncharacterized protein LOC111022806 [Momordica charantia]5.0e-3154.27Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARI IISG+IFLCIISGG LL LYL+LP+S++ DWYPIVGIVLV+TPWIFWLLVYL+HC KP   Q      N  NSS N+     N +G  +
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
                +SPGGGKRRVHFG      ++  +D N +  +N ++     P+E+E+PL  S SSS
Subjt:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

XP_023000624.1 uncharacterized protein LOC111494867 [Cucurbita maxima]6.0e-3756.8Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDA I IISGL+FLC+++GG LLCLYLF+PES++ DWY +VGI+LVSTPWIFW LVYL+HCLKP ++Q NA  +  ++SS+N+  +  NN+GG  
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVES-----PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
           NL +VES     PG GKRRVHFGAVVV G  PQ  +  SH+S+SK+      + NE    S T SS
Subjt:  TEGNLGEVES-----PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

XP_038875814.1 uncharacterized protein LOC120068181 [Benincasa hispida]6.4e-7187.2Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARIFIISGLIFLCIISGG LLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWL +Y +HCLKPTKVQLNA G NNNNS + KTEA N N+GGAT
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
         EGNLGEVESPG GKRRVHFGAVVVM KQPQLDRN+SHES SKQPTTM+P+E EVPLRSSTSSS
Subjt:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LN77 Uncharacterized protein5.0e-5372.56Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARI IISGLIFLCII GGFLLCLYLFLPESQT DWYP +GIVLVSTPWIFWL VY++HCLKPTKV LN  GSN+ NSS+ KTEA+ NN     
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
         E ++G+ E+PGGGKR+VHFGAV VM KQP LDRN SH   SKQ T+ +P+E E+PLR STSSS
Subjt:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

A0A2I4FRW9 uncharacterized protein LOC1090015195.2e-2648.34Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKP-TKVQLNALGSNNNNSSNNKTEANNNNNGGA
        MEERKGDAR++IIS + F CI++GG LL LY+F+P++ +  WYPIVG++LV  PW FWL  YL+ C+KP T  QL     +  NSS+  T+      GGA
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKP-TKVQLNALGSNNNNSSNNKTEANNNNNGGA

Query:  TTEGNLGEVESP-----GGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQP
        T   N   +ESP     GGG+RRVHFGAVVV+G +     N +H++    P
Subjt:  TTEGNLGEVESP-----GGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQP

A0A6A1W806 Uncharacterized protein3.1e-2343.5Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARI+IIS L F CI++GG LLCLY+FLP++Q+  WYP+ GI+LV  PW FWL  YL+ CLKP+         N   SS+  T      + GAT
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESP---GGGKRRVHFGAVVVMGKQP----QLDRNFSHESNSKQP---------TTMAPKENEVPLRSST
        T  N    ESP      +RRVHFGAVVV+G +     Q +R+    +++K+           ++  +E+E+P+ S T
Subjt:  TEGNLGEVESP---GGGKRRVHFGAVVVMGKQP----QLDRNFSHESNSKQP---------TTMAPKENEVPLRSST

A0A6J1DSP4 uncharacterized protein LOC1110228062.4e-3154.27Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDARI IISG+IFLCIISGG LL LYL+LP+S++ DWYPIVGIVLV+TPWIFWLLVYL+HC KP   Q      N  NSS N+     N +G  +
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
                +SPGGGKRRVHFG      ++  +D N +  +N ++     P+E+E+PL  S SSS
Subjt:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

A0A6J1KKI3 uncharacterized protein LOC1114948672.9e-3756.8Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT
        MEERKGDA I IISGL+FLC+++GG LLCLYLF+PES++ DWY +VGI+LVSTPWIFW LVYL+HCLKP ++Q NA  +  ++SS+N+  +  NN+GG  
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVES-----PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
           NL +VES     PG GKRRVHFGAVVV G  PQ  +  SH+S+SK+      + NE    S T SS
Subjt:  TEGNLGEVES-----PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein6.5e-0531.29Show/hide
Query:  EERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGS-NNNNSSNNKTEANNNNNGGAT
        + R G A I +I+  +FL I  GG  L  Y  LP    P W   +GIV V  PW FW+L + +  +  T      +GS  NNN++N +T   + +    +
Subjt:  EERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGS-NNNNSSNNKTEANNNNNGGAT

Query:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSS
         E    +   P    +    G V+V  +  Q  +  S  SNS    T+A  E+E+PL  S +S
Subjt:  TEGNLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSS

AT5G17590.1 Putative membrane lipoprotein6.7e-1033.92Show/hide
Query:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHC-LKPTKV---QLNALGSNNNNSSNNKTEANNNNN
        M++RKGD RI+II+ L   CI+ GG LL LYL    S     +   G+V V  PW+FW L Y++ C LKP  +   Q     S +  S + +    N   
Subjt:  MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHC-LKPTKV---QLNALGSNNNNSSNNKTEANNNNN

Query:  GGATTEGNLGEVESPGGGKRRVHFGAVVVMGKQ---PQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS
           TT  +     SP  G++ V FG VVV+G +    + D N S  +N  Q      +E +     S S S
Subjt:  GGATTEGNLGEVESPGGGKRRVHFGAVVVMGKQ---PQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATAATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTCTACCTTTTCCTCCCTGAATC
GCAAACTCCCGATTGGTATCCGATCGTCGGGATTGTATTGGTTTCAACTCCCTGGATCTTTTGGCTTTTGGTTTATTTGCATCATTGCTTGAAACCTACCAAAGTTCAAC
TCAATGCCTTGGGCTCTAATAATAACAACTCATCTAACAACAAGACAGAGGCTAATAATAATAATAATGGTGGTGCAACAACTGAAGGCAATCTTGGTGAAGTTGAATCC
CCCGGTGGAGGGAAACGCCGAGTGCATTTTGGTGCAGTGGTTGTCATGGGAAAACAGCCACAATTAGATAGGAATTTTAGCCATGAAAGCAATTCAAAACAGCCTACTAC
TATGGCTCCAAAGGAAAATGAAGTGCCATTGAGGTCGTCAACCTCGTCGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATTTCTCTCCCTTTCTTCTCTCTATTATTATGTGCCTTTGAGAAGTTGCAAATGAGTTGGTTTAGTCATAATAACATACCAATTACAAGCCAACTTTGTAGGGTTTGAAA
CTCCCTACCTGCCATTGCATTCTTTAGCTTGTTTGCCCAAAAAAGGAAATGAATGTGTTGAATGAATCTATGGCCTAATTAAACAACACAACTATATCCCACAACTTCAT
CCATTTTCAGATATTTGATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATAATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTCTAC
CTTTTCCTCCCTGAATCGCAAACTCCCGATTGGTATCCGATCGTCGGGATTGTATTGGTTTCAACTCCCTGGATCTTTTGGCTTTTGGTTTATTTGCATCATTGCTTGAA
ACCTACCAAAGTTCAACTCAATGCCTTGGGCTCTAATAATAACAACTCATCTAACAACAAGACAGAGGCTAATAATAATAATAATGGTGGTGCAACAACTGAAGGCAATC
TTGGTGAAGTTGAATCCCCCGGTGGAGGGAAACGCCGAGTGCATTTTGGTGCAGTGGTTGTCATGGGAAAACAGCCACAATTAGATAGGAATTTTAGCCATGAAAGCAAT
TCAAAACAGCCTACTACTATGGCTCCAAAGGAAAATGAAGTGCCATTGAGGTCGTCAACCTCGTCGTCTTAGCATACGATGTAGATCACGAAAAAACAGCTATCCAGTGC
TCATTTGTTTAACAACATGAAGAGGTGCAAATTCAAACCTCTGACTTTGTTGGTGGAGGTATAATGCTTTAACTAATTGAGTTATGATTAAGTTGACAATCATTCATGTG
ATTTATAGGTAAATTATTCTTTATTATTACGATTATTATTATTTTATTTATCTAGATCGGACAGATATTTGATTATGGTTAATTACCACCACATATGTAAATAAATGTAA
AGAATGAGAATGTATGGTTGTATGTTGTTGAGGGAATGGAATAGAAGGCATTTCAAT
Protein sequenceShow/hide protein sequence
MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNALGSNNNNSSNNKTEANNNNNGGATTEGNLGEVES
PGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPLRSSTSSS