; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G09000 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09000
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationClcChr06:11314056..11315636
RNA-Seq ExpressionClc06G09000
SyntenyClc06G09000
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-9938.24Show/hide
Query:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI
        S LDRFL ++ WE  F       L R  SDHFPI+LE+    WGPSPFRF N +L +      IE    + +Q G+AG+  +   + + + +K W  +  
Subjt:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI

Query:  RKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFRE
         K +  +K  +  + Q +          +  + R++L A+L  I  TE +   QK K  W+  GDE+S FFH+   A++++ LI +++NN G    +  +
Subjt:  RKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFRE

Query:  IETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK
        I    I +++ +Y+   N+  F  NLDW  +S+  +  L   F E EI   LK F +NKAPG DG+ ++FL K W  +K +   +F + ++   ++  V 
Subjt:  IETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK

Query:  KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTF
        +  I LI KK+      DFRPISLTT +YK+IAK LA RLK+ +P  I+ +Q AF++GRQI + I+IANE ++ +R  +++G+++KLD+EKAFD+++W F
Subjt:  KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTF

Query:  SEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIF
         + VL +KN+  +W   I  CI + +YSI I+ RPRGRI  SRGIRQGDPLSPFIF+L  + LS L++ L  K K  G +     +++  + F DD LIF
Subjt:  SEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIF

Query:  CKYDGEMLENLRKTIELFEWCSG
         +   + + NL+  + LFE  SG
Subjt:  CKYDGEMLENLRKTIELFEWCSG

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.5e-10037.81Show/hide
Query:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK
        LDRFL S+ W+  F  +    L R  SDH PI LE     WGP+PFRF N WLL+ +               GW G   +   + VK  +K+W +     
Subjt:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK

Query:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE
         + ++K IL  L + +   +  +L S  +  R+    EL  +   EE    QKS++ W+K GD +S+FFH+    ++ R  I  L++ +G    +  +I 
Subjt:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE

Query:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN
          +++++  LYSK          +DW  +S E    L   FTE E+R+A+    + KAPG DGF +    + W+ +K   + +F E +TNG ++      
Subjt:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN

Query:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE
        FI L+ KK  ++   D+RPISL T +YK+IAKVL+ RL+KV+   I+ +Q AF+EGR ILD ++IANE+V+E RR+ ++G + K+D EKA+D VDW F +
Subjt:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE

Query:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK
         VL+ K F  +W  WI GC+ +  ++I ++   +G + ASRG+RQGDPLSPF+F L+++VLS ++ R       EGF VGRD+  V LLQF DDT+ F K
Subjt:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK

Query:  YDGEMLENLRKTIELFEWCSG
           E L+NL+  + +F   SG
Subjt:  YDGEMLENLRKTIELFEWCSG

RVW65579.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.2e-9938.39Show/hide
Query:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK
        LDRFL SN WE+ F  +    L R  SDH+PI+LE   F WGP+PFRF N WL +        R       +GW G   +   + VK  +K+W      +
Subjt:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK

Query:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE
          +++K IL +L   +S  +   L    L  R+    EL  +   EE +  QK+++ W+K GD +S+FFH+    ++ R  I EL N  G    +   I+
Subjt:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE

Query:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN
          ++ Y++ LY+           LDW  +  E  SRL + FTE EI KA+    R+KAPG DGF +      W+ +K   + +F E + +G ++     +
Subjt:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN

Query:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE
        FI L+ KK  +    DFRPISL T +YK+IAKVLA RL+ V+   I  TQ AF++GRQILD ++IANEIV+E RR  ++G + K+D EKA+D V W F +
Subjt:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE

Query:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK
         VL  K F  RW  W+ GC+ +  Y++ ++   +G + ASRG+RQGDPLSPF+F ++++VLS ++ +   +N  EGF VGR++  V  LQF DDT+ F  
Subjt:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK

Query:  YDGEMLENLRKTIELFEWCSG
           E L  L+  + +F   SG
Subjt:  YDGEMLENLRKTIELFEWCSG

RVW90400.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.2e-10038.39Show/hide
Query:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK
        LDRFL SN WE+ F  +    L R  SDH+PI+LE   F WGP+PFRF N WL +        R       +GW G   +   + VK  +K+W      +
Subjt:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK

Query:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE
          +++K IL +L   +S  +   L    L  R+    EL  +   EE +  QK+++ W+K GD +S+FFH+    ++ R  I EL N  G    +   I+
Subjt:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE

Query:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN
          ++ Y++ LY+           LDW  +  E  SRL   FTE EI KA+    R+KAPG DGF +      W+ +K   + +F E + +G ++     +
Subjt:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN

Query:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE
        FI LI KK  +    D+RPISL T +YK+IAKVLA RL+ V+   I  TQ AF++GRQILD ++IANEIV+E RR  ++G + K+D EKA+D V W F +
Subjt:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE

Query:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK
         VL  K F  RW  W+ GC+ +  Y++ ++   +G + ASRG+RQGDPLSPF+F ++++VLS ++ +   +N  EGF VGR++  V  LQF DDT+ F  
Subjt:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK

Query:  YDGEMLENLRKTIELFEWCSG
           E L  L+  + +F   SG
Subjt:  YDGEMLENLRKTIELFEWCSG

TYJ99326.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-10038.97Show/hide
Query:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI
        S LDRFL S  WE  F       L R  SDHFPI+LE+ +  WGPSPFRF N +L +      IE    + +Q G+AG+  +   + + + +K W  E  
Subjt:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI

Query:  RKQQRQEK---PILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKS
         K +  +K     +D++ + E+   S +   +  + R +L A+L  I  TE +   QK K  W+  GDE+S FFH+   A++++ LI +++N  G    +
Subjt:  RKQQRQEK---PILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKS

Query:  FREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDS
          +I    I +++ +Y+   N+  F  NLDW  +S+  +  L   F E EI   LK F +NKAPG DGF ++FL K W  +K +   +F + ++N  ++ 
Subjt:  FREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDS

Query:  CVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVD
         V +  I  I KK++     DFRPISLTT +YK+IAKVLA RLK+ +P  I+ +Q AF++GRQI + I+IANE ++ +R  +++G+++KLD+EKAFD+++
Subjt:  CVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVD

Query:  WTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDT
        W F + +L +KN+  +W   I  CI + +YSI I+ RPRGRI  SRGIRQGDPLSPFIF+L  + LS L++ L  K K  G   G   +++  + F DD 
Subjt:  WTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDT

Query:  LIFCKYDGEMLENLRKTIELFEWCSG
        LIF +   + + NL+  + LFE  SG
Subjt:  LIFCKYDGEMLENLRKTIELFEWCSG

TrEMBL top hitse value%identityAlignment
A0A438FWU5 LINE-1 retrotransposable element ORF2 protein7.1e-10137.81Show/hide
Query:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK
        LDRFL S+ W+  F  +    L R  SDH PI LE     WGP+PFRF N WLL+ +               GW G   +   + VK  +K+W +     
Subjt:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRK

Query:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE
         + ++K IL  L + +   +  +L S  +  R+    EL  +   EE    QKS++ W+K GD +S+FFH+    ++ R  I  L++ +G    +  +I 
Subjt:  QQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIE

Query:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN
          +++++  LYSK          +DW  +S E    L   FTE E+R+A+    + KAPG DGF +    + W+ +K   + +F E +TNG ++      
Subjt:  TLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN

Query:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE
        FI L+ KK  ++   D+RPISL T +YK+IAKVL+ RL+KV+   I+ +Q AF+EGR ILD ++IANE+V+E RR+ ++G + K+D EKA+D VDW F +
Subjt:  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSE

Query:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK
         VL+ K F  +W  WI GC+ +  ++I ++   +G + ASRG+RQGDPLSPF+F L+++VLS ++ R       EGF VGRD+  V LLQF DDT+ F K
Subjt:  KVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCK

Query:  YDGEMLENLRKTIELFEWCSG
           E L+NL+  + +F   SG
Subjt:  YDGEMLENLRKTIELFEWCSG

A0A803P8A0 Uncharacterized protein2.8e-10540.08Show/hide
Query:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI
        S LDRFL  NNW   F   R   LVRL SDH P+++++    WGP PFRF N+WL +       E         GW G   +   + ++   K+W   F 
Subjt:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI

Query:  RKQQRQEKPILDMLVQEESRAESIDLPSLEL-DLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFR
          Q +  K  L+  +    R E     +  L D R  L  E   +   EER++  KSK  W K GD +SRFFH  L A+K RN I  +  + G+   S +
Subjt:  RKQQRQEKPILDMLVQEESRAESIDLPSLEL-DLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFR

Query:  EIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCV
        EI   +I ++  LY+     G+    ++WQ +++    +L   F E E+R  +     +KAPG DGF +      WE +K   + +F   ++ G+++  +
Subjt:  EIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCV

Query:  KKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWT
           FICLI K+ ++   KDFRPISL T VYK+IAK LA RL+ V+   I+ TQSAF+EGRQILD +++ANE VE+YR   KKG++LK+D EKA+DRVDW 
Subjt:  KKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWT

Query:  FSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLI
        F + VLR+K F  RW  WI GC+ +  +SIF++ R RG+   SRG+RQGDPLSPF+F L+++VL  ++ +      F GF +G+D + +  LQF DDTL 
Subjt:  FSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLI

Query:  FCKYDGEMLENLRKTIELFEWCSG
        F K D + L+ L K +E F   SG
Subjt:  FCKYDGEMLENLRKTIELFEWCSG

A0A803QEA6 Uncharacterized protein8.9e-10440.19Show/hide
Query:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI
        S LDRFL +NNW   F   R   LVR+ SDH P+++++    WGP PFRF N+WL +       ER        GW G   +   + ++  +K+W     
Subjt:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI

Query:  RKQQRQEKPILD--MLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSF
          Q R +K  L+  + V ++    S    SL LD R  L  E   +   EER    KSK  W + GD +SRFFH  L A+K RN I  +    G+   + 
Subjt:  RKQQRQEKPILD--MLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSF

Query:  REIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSC
        +EI   +I ++  LY+     GS    ++WQ +++    +L   F E E+R  +     NKAPG DGF +  L   WE +K   + +F   +  G+++  
Subjt:  REIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSC

Query:  VKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDW
        +   FICLI K+ ++   KDFRPISL T VYK+IAK LA RL+ V+   I+ TQSAF+EGRQILD +++ANE VE+YR   +KG++LK+D EKA+DRVDW
Subjt:  VKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDW

Query:  TFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTL
         F + VLR+K F  RW  WI GC+ +  +SIFI+ R RG+   SRG+RQGDPLSPF+F +I++VL  ++ +        GF +G+D + +  LQF DDTL
Subjt:  TFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTL

Query:  IFCKYDGEMLENLRKTIELFEWCSG
         F K D   L+ L K ++ F   SG
Subjt:  IFCKYDGEMLENLRKTIELFEWCSG

A0A803QI00 Uncharacterized protein1.2e-10338.34Show/hide
Query:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI
        S LDRFL +NNW   +   R   LVRL SDH P+++++    WGP PFRF N WL ++       R     + +GW G   +S  +  +  +K+W     
Subjt:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI

Query:  RKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFRE
         + +  ++ +   LV  +    +       ++ R  L  E   +   EER++  KSK  W K GD +SRFFH  L A+K RN I  +    G+      E
Subjt:  RKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFRE

Query:  IETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK
        I   +I ++  LY+     GS   +++WQ ++     +L +SF E E+++++     +KAPG DGF +      WE +K   + +F      G+++  + 
Subjt:  IETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK

Query:  KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTF
        + FICLI K+ ++   KDFRPISL T VYK++AK LA RL+ V+   I+ TQSAF+EGRQILD ++IANE VE++R   KKG++ K+D+EKA+DRVDW F
Subjt:  KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTF

Query:  SEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIF
         + VL+EK F   W  WI GC+ +  +S+ I+ R RG+   SRG+RQGDPLSPF+F L+ +VL  L+ +  + + F GF VG+D + +  LQF DDTL F
Subjt:  SEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIF

Query:  CKYDGEMLENLRKTIELFE
         K +     +LRK +E+ E
Subjt:  CKYDGEMLENLRKTIELFE

A0A803QQM3 Uncharacterized protein1.9e-10138.56Show/hide
Query:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI
        S LDRFL SNNW   +   R   LVRL SDH P+++++    WGP PFRF N+WL +       E         GW G   +   + ++  +K+W     
Subjt:  SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFI

Query:  RKQQRQE------KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNP
         + +  +        +LD L    S  +S+      LD R  L  E   ++  EER +  KSK  W + GD +SR FH  L A+K +N I  +  + G+ 
Subjt:  RKQQRQE------KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNP

Query:  TKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGK
          + +EI   +I ++  LY+    +G+    ++W  + +    +L   F E E+R  +     NKAPG DGF +  L   WE +K   + +F   +  G+
Subjt:  TKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGK

Query:  LDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFD
        ++  +   FICLI K+ ++   KD+RPISL T VYK+IAK LA RL+ V+   I+ TQSAF+EGRQILD +++ANE VE+YR   KKG +LK+D EKA+D
Subjt:  LDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFD

Query:  RVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFV
        RVDW F + V+R+K F  RW  WI GC+    +SIFI+ R RG+   SRG+RQ DPLSPF+F LI++VL  ++ +        GF +G+D + +  LQF 
Subjt:  RVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFV

Query:  DDTLIFCKYDGEMLENLRKTIELFEWCSG
        DDTL F K D   L+ L K +E F   SG
Subjt:  DDTLIFCKYDGEMLENLRKTIELFEWCSG

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein1.7e-3526.46Show/hide
Query:  DSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESS
        D+  Q+ W  F  +   + + ++  K      RKQ+R +   L   ++E  + E     +      + + AEL  I   +    I +S+  + +  ++  
Subjt:  DSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESS

Query:  RFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALY-SKLPNAGSFPSNLDWQS---VSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLD
        R   + +  K+ +N I  + N++G+ T    EI+T + +YYK LY +KL N     + LD  +   ++ E+   L    T  EI   +      K+PG D
Subjt:  RFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALY-SKLPNAGSFPSNLDWQS---VSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLD

Query:  GFIVEFLIKFWEKLKGHFISLFNELYTNGKL-DSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILD
        GF  EF  ++ E+L    + LF  +   G L +S  + + I + K  +D    ++FRPISL  I  K++ K+LA R+++ +  +I   Q  FI G Q   
Subjt:  GFIVEFLIKFWEKLKGHFISLFNELYTNGKL-DSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILD

Query:  PIIIANEIVEEYRRNRKKGW-LLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEV
         I  +  +++   R + K   ++ +D EKAFD++   F  K L +   D  ++  I      P  +I ++ +         G RQG PLSP +F ++ EV
Subjt:  PIIIANEIVEEYRRNRKKGW-LLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEV

Query:  LSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG
        L+  I    ++ + +G  +G+++V + L  F DD +++ +      +NL K I  F   SG
Subjt:  LSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG

P08548 LINE-1 reverse transcriptase homolog2.4e-2926.16Show/hide
Query:  FIRKQQRQE-KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKS
        F++K +R+E   ++  L Q E    S   PS   ++ + + AEL  I        I KSK  + +  ++  +        K+ ++LI  + N     T  
Subjt:  FIRKQQRQE-KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKS

Query:  FREIETLVIDYYKALYS-KLPNAGSFPSNLD---WQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNG
          EI+ ++ +YYK LYS K  N       L+      +S ++   L    +  EI   +++  + K+PG DGF  EF   F E+L    ++LF  +   G
Subjt:  FREIETLVIDYYKALYS-KLPNAGSFPSNLD---WQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNG

Query:  KLDSCVKKNFICLIKKK-KDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKG-WLLKLDMEK
         L +   +  I LI K  KD    +++RPISL  I  K++ K+L  R+++ +  II   Q  FI G Q    I  +  +++   + + K   +L +D EK
Subjt:  KLDSCVKKNFICLIKKK-KDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKG-WLLKLDMEK

Query:  AFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLL
        AFD +   F  + L++   +  ++  I      P  +I ++           G RQG PLSP +F ++ EVL+  I     +   +G  +G +++ + L 
Subjt:  AFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLL

Query:  QFVDDTLIFCKYDGEMLENLRKTIELFEWCSG
         F DD +++ +   +    L + I+ +   SG
Subjt:  QFVDDTLIFCKYDGEMLENLRKTIELFEWCSG

P11369 LINE-1 retrotransposable element ORF2 protein2.5e-3130.86Show/hide
Query:  LIFELLNNQGNPTKSFREIETLVIDYYKALYS-KLPNAGSFPSNLDWQSV---SDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKL
        LI ++ N +G+ T    EI+  +  +YK LYS KL N       LD   V   + +Q   L +  +  EI   +      K+PG DGF  EF   F E L
Subjt:  LIFELLNNQGNPTKSFREIETLVIDYYKALYS-KLPNAGSFPSNLDWQSV---SDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKL

Query:  KGHFISLFNELYTNGKLDSCVKKNFICLI-KKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRR
              LF+++   G L +   +  I LI K +KD    ++FRPISL  I  K++ K+LA R+++ + +II P Q  FI G Q    I  +  ++    +
Subjt:  KGHFISLFNELYTNGKLDSCVKKNFICLI-KKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRR

Query:  NRKKG-WLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKF
         + K   ++ LD EKAFD++   F  KVL        ++  I      P  +I ++      I    G RQG PLSP++F ++ EVL+  I    ++ + 
Subjt:  NRKKG-WLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKF

Query:  EGFIVGRDKVHVPLLQFVDDTLIF
        +G  +G+++V + LL   DD +++
Subjt:  EGFIVGRDKVHVPLLQFVDDTLIF

P14381 Transposon TX1 uncharacterized 149 kDa protein2.8e-3826.41Show/hide
Query:  MSRSLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGP-SPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAG----FIILSNFRAV-KVS
        +S+S +DR  +S++     + + +   +  FSDH  + L        P + +   NN LL  +  G  +   D+    GW      F  L+ +  V KV 
Subjt:  MSRSLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGP-SPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAG----FIILSNFRAV-KVS

Query:  MKKWQVEFIRKQQRQEKPILDMLVQE----ESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFEL
        +K    E+ +    Q    ++ L  E    E R    +  +L+ +      A L ++ + + R    +S++  L   D  SRFF+     K  R  I  L
Subjt:  MKKWQVEFIRKQQRQEKPILDMLVQE----ESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFEL

Query:  LNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQS---VSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFIS
            G P +    I      +Y+ L+S  P +      L W     VS+ +  RL    T  E+ +AL+    NK+PGLDG  +EF   FW+ L   F  
Subjt:  LNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQS---VSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFIS

Query:  LFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWL
        +  E +  G+L    ++  + L+ KK D  + K++RP+SL +  YK++AK ++ RLK V+  +I P QS  + GR I D + +  +++   RR       
Subjt:  LFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWL

Query:  LKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRD
        L LD EKAFDRVD  +    L+  +F  +++ ++     + +  + I+      +   RG+RQG PLS  ++ L  E    L+     + +  G ++   
Subjt:  LKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRD

Query:  KVHVPLLQFVDDTLI
         + V L  + DD ++
Subjt:  KVHVPLLQFVDDTLI

Q03278 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)9.7e-1525.31Show/hide
Query:  WEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEE
        W  +     SLFN +  +G+       +   LI K+   +    FRP+S+ ++  +   ++LA R+ +    ++   Q AFI    + +   + + +++E
Subjt:  WEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEE

Query:  YRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKN
         R   K  ++  LD++KAFD V+       LR K        +I+   +N K  + + +     I  +RG+RQGDPLSP +F  + + +      L R  
Subjt:  YRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKN

Query:  KFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFE
        +  GF++G +K+    L F DD ++      E  E L+ ++   E
Subjt:  KFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFE

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein4.3e-1827.03Show/hide
Query:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFP-ILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQ--HGWAGFIILSNFRAVKVSMKKWQVEF
        LDR + + +W   F        +   SDH P I++           FR+ +   L+     ++  T+    Q   G   F +  + +A K   K    + 
Subjt:  LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFP-ILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQ--HGWAGFIILSNFRAVKVSMKKWQVEF

Query:  IRKQQRQEKPILDMLVQEESRA---ESIDLPSLELDLRSSLN---AELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGN
            Q + K  LD L   +S+     S  L  +E   R   N   A L S YR       QKS++ WL+ GD ++RFFH+ + A + +NLI  L  +   
Subjt:  IRKQQRQEKPILDMLVQEESRA---ESIDLPSLELDLRSSLN---AELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGN

Query:  PTKSFREIETLVIDYYKALYSK-----LPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNE
          ++  +++ +++ YY  L         P++     ++     +D   SRL A  ++ EI  A+    RNKAPG D F  EF  + W  +K   I+   E
Subjt:  PTKSFREIETLVIDYYKALYSK-----LPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNE

Query:  LYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVI
         +  G L        I LI K         FRP+S  T+VYK+I
Subjt:  LYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVI

AT4G20520.1 RNA binding;RNA-directed DNA polymerases2.3e-1142.68Show/hide
Query:  LAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNR-KKGW-LLKLDMEKAFDRVDWTFSEKVLREKNFDTRWI
        + +RLK +M ++I P Q++FI GR   D I+   E V   RR +  KGW LLKLD+EKA+DR+ W + E  L    F   W+
Subjt:  LAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNR-KKGW-LLKLDMEKAFDRVDWTFSEKVLREKNFDTRWI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)3.3e-1043.06Show/hide
Query:  YSIF-ISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDT
        Y +F I+  P+G +  SRG+RQGDPLSP++F+L +EVLS L  R   + +  G  V  +   +  L F DDT
Subjt:  YSIF-ISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGTTCATTATTAGATAGATTTCTTGTATCCAATAATTGGGAGGAGGATTTCGAAGACACAAGAGTGACGAGGCTAGTAAGATTATTCTCAGACCATTTCCCCAT
CCTACTAGAAGCAGGTGCTTTTGATTGGGGACCATCTCCATTTAGATTTTGTAACAACTGGTTGCTAAATCATCAATGCGTTGGAATCATCGAAAGAACTTTAGACTCGG
GCAATCAACACGGATGGGCAGGATTCATCATTCTGTCTAATTTTAGAGCAGTCAAAGTTTCAATGAAAAAGTGGCAAGTGGAGTTTATTAGAAAGCAACAGAGGCAAGAG
AAGCCAATTTTAGACATGCTTGTCCAGGAAGAATCCAGAGCTGAATCAATAGATCTCCCCTCATTAGAGCTTGATTTGAGATCCTCCCTAAACGCTGAATTGATGAGTAT
CTATAGAACGGAGGAAAGGAACCTTATCCAAAAAAGTAAACTCAATTGGCTTAAATTAGGGGATGAAAGTTCGAGATTTTTCCACCAATTCCTTGCTGCAAAAAAGAGAA
GGAACCTAATCTTTGAATTATTAAATAACCAAGGCAATCCAACAAAATCCTTTCGAGAGATTGAGACCTTAGTCATTGATTACTATAAAGCCTTGTATTCAAAGCTGCCA
AATGCAGGTTCCTTTCCAAGCAATCTGGATTGGCAATCAGTATCAGATGAGCAAAACAGTAGGCTGGTTGCAAGCTTCACTGAGGGAGAAATCAGAAAAGCCTTAAAAGA
TTTCGGGAGGAATAAAGCACCTGGTCTGGATGGTTTTATAGTTGAATTTCTCATCAAGTTTTGGGAGAAGCTTAAGGGGCACTTCATTAGTCTCTTCAATGAATTGTATA
CAAATGGAAAATTGGACTCTTGTGTCAAGAAGAACTTTATTTGCTTAATTAAAAAGAAAAAGGACGCAATTGTGACTAAAGACTTCCGCCCAATAAGTCTTACAACGATT
GTGTACAAAGTAATTGCCAAAGTTCTTGCCAAAAGATTGAAGAAAGTCATGCCAAGCATCATTGCTCCAACCCAAAGTGCTTTCATAGAGGGGAGACAAATTTTAGATCC
TATTATTATAGCAAATGAGATTGTTGAAGAATATAGACGTAATCGGAAGAAAGGTTGGCTACTTAAGCTTGATATGGAAAAGGCTTTTGATCGAGTCGATTGGACTTTCT
CGGAGAAGGTTCTAAGAGAGAAGAATTTCGATACAAGATGGATAGCGTGGATTTTGGGTTGCATTAAAAATCCTAAGTACTCAATCTTCATCAGTAGGCGGCCAAGAGGA
AGAATATTGGCATCAAGAGGAATCCGGCAAGGTGACCCCCTTTCTCCTTTCATTTTCCTTCTAATCAGTGAGGTATTGAGCAGCCTCATTTCAAGACTCCATAGGAAAAA
TAAGTTTGAAGGATTCATTGTTGGAAGAGATAAAGTTCATGTGCCCTTGCTTCAATTCGTGGATGACACACTAATCTTTTGCAAATATGATGGAGAAATGTTAGAAAACT
TGCGCAAAACTATAGAGCTTTTTGAATGGTGCTCCGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGTTCATTATTAGATAGATTTCTTGTATCCAATAATTGGGAGGAGGATTTCGAAGACACAAGAGTGACGAGGCTAGTAAGATTATTCTCAGACCATTTCCCCAT
CCTACTAGAAGCAGGTGCTTTTGATTGGGGACCATCTCCATTTAGATTTTGTAACAACTGGTTGCTAAATCATCAATGCGTTGGAATCATCGAAAGAACTTTAGACTCGG
GCAATCAACACGGATGGGCAGGATTCATCATTCTGTCTAATTTTAGAGCAGTCAAAGTTTCAATGAAAAAGTGGCAAGTGGAGTTTATTAGAAAGCAACAGAGGCAAGAG
AAGCCAATTTTAGACATGCTTGTCCAGGAAGAATCCAGAGCTGAATCAATAGATCTCCCCTCATTAGAGCTTGATTTGAGATCCTCCCTAAACGCTGAATTGATGAGTAT
CTATAGAACGGAGGAAAGGAACCTTATCCAAAAAAGTAAACTCAATTGGCTTAAATTAGGGGATGAAAGTTCGAGATTTTTCCACCAATTCCTTGCTGCAAAAAAGAGAA
GGAACCTAATCTTTGAATTATTAAATAACCAAGGCAATCCAACAAAATCCTTTCGAGAGATTGAGACCTTAGTCATTGATTACTATAAAGCCTTGTATTCAAAGCTGCCA
AATGCAGGTTCCTTTCCAAGCAATCTGGATTGGCAATCAGTATCAGATGAGCAAAACAGTAGGCTGGTTGCAAGCTTCACTGAGGGAGAAATCAGAAAAGCCTTAAAAGA
TTTCGGGAGGAATAAAGCACCTGGTCTGGATGGTTTTATAGTTGAATTTCTCATCAAGTTTTGGGAGAAGCTTAAGGGGCACTTCATTAGTCTCTTCAATGAATTGTATA
CAAATGGAAAATTGGACTCTTGTGTCAAGAAGAACTTTATTTGCTTAATTAAAAAGAAAAAGGACGCAATTGTGACTAAAGACTTCCGCCCAATAAGTCTTACAACGATT
GTGTACAAAGTAATTGCCAAAGTTCTTGCCAAAAGATTGAAGAAAGTCATGCCAAGCATCATTGCTCCAACCCAAAGTGCTTTCATAGAGGGGAGACAAATTTTAGATCC
TATTATTATAGCAAATGAGATTGTTGAAGAATATAGACGTAATCGGAAGAAAGGTTGGCTACTTAAGCTTGATATGGAAAAGGCTTTTGATCGAGTCGATTGGACTTTCT
CGGAGAAGGTTCTAAGAGAGAAGAATTTCGATACAAGATGGATAGCGTGGATTTTGGGTTGCATTAAAAATCCTAAGTACTCAATCTTCATCAGTAGGCGGCCAAGAGGA
AGAATATTGGCATCAAGAGGAATCCGGCAAGGTGACCCCCTTTCTCCTTTCATTTTCCTTCTAATCAGTGAGGTATTGAGCAGCCTCATTTCAAGACTCCATAGGAAAAA
TAAGTTTGAAGGATTCATTGTTGGAAGAGATAAAGTTCATGTGCCCTTGCTTCAATTCGTGGATGACACACTAATCTTTTGCAAATATGATGGAGAAATGTTAGAAAACT
TGCGCAAAACTATAGAGCTTTTTGAATGGTGCTCCGGTTAG
Protein sequenceShow/hide protein sequence
MSRSLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQE
KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLP
NAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTI
VYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRG
RILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG