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Clc06G09175 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09175
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMalic enzyme
Genome locationClcChr06:11679725..11680217
RNA-Seq ExpressionClc06G09175
SyntenyClc06G09175
Gene Ontology termsGO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR012302 - Malic enzyme, NAD-binding
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ04197.1 NADP-malic enzyme 4 [Actinidia rufa]3.1e-1850.44Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-------------------------------VVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALS
        +VLAGL+AALKL GGTLA+HK LFLG G+                               +  IKPTVLIG+SG+GRTFTKEV+E +A++ E+PI+ ALS
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-------------------------------VVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALS

Query:  NPTSQFQCIAKEA
        NPTSQ +C A+EA
Subjt:  NPTSQFQCIAKEA

KAE9459150.1 hypothetical protein C3L33_08946, partial [Rhododendron williamsianum]2.0e-1749.12Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD---IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFAL
        +VL+GL+AALKL GGTLADH  LFLG G+                             +VD   IKP+VLIGTSG+G+TFTK+V+E +A+  E+P+IFAL
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD---IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFAL

Query:  SNPTSQFQCIAKEA
        SNPTSQ +C A++A
Subjt:  SNPTSQFQCIAKEA

KAF8678602.1 hypothetical protein HU200_046220 [Digitaria exilis]1.0e-1650.88Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD---IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFAL
        +VLAGL+AA KL GGTLADH  LFLG G+                             +VD   IKPTVLIGTSG G+TFTK+V+E I++  ERPII AL
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD---IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFAL

Query:  SNPTSQFQCIAKEA
        SNPTSQ +C A++A
Subjt:  SNPTSQFQCIAKEA

KAG8084868.1 hypothetical protein GUJ93_ZPchr0010g10992 [Zizania palustris]2.7e-1750.42Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVG---------------KVVDI----------------------KPTVLIGTSGMGRTFTKEVMEVIAAIKERP
        +VLAGL+AALK+ GGTLADH  LFLG G               K  DI                      KPTVLIGTSG+GRTFTKEV+E +A+  ERP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVG---------------KVVDI----------------------KPTVLIGTSGMGRTFTKEVMEVIAAIKERP

Query:  IIFALSNPTSQFQCIAKEA
        IIF+LSNPTS  +C A+EA
Subjt:  IIFALSNPTSQFQCIAKEA

XP_021683041.1 NADP-dependent malic enzyme-like [Hevea brasiliensis]5.9e-1743.54Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGLVAALKL GGTLADHK LFLG G+                                                                 V DIKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG+GRTFTKEV+E +A+  ERPII ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

TrEMBL top hitse value%identityAlignment
A0A0R0IQ37 Malic enzyme1.1e-1654.17Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGKVVD--------------IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        +VLAG+VAALKL GGTL +H  LFLG G+                 IKPTVLIG+ G+GRTFTKEV+E + +  ++P+I ALSNPTSQ +C A+EA
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGKVVD--------------IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

A0A2C9UZ88 Malic enzyme1.1e-1642.86Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGLVAALKL GGTLADH+ LFLG G+                                                                 V DIKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG+GRTFTKEV+E +A+  ERPII ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

A0A2C9W2C4 Malic enzyme4.9e-1743.54Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGLVAALKL GGTLADHK LFLG G+                                                                 V DIKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG+GRTFTKEV+E +A+  ERPII ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

A0A6A4LM78 Malic enzyme (Fragment)9.9e-1849.12Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD---IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFAL
        +VL+GL+AALKL GGTLADH  LFLG G+                             +VD   IKP+VLIGTSG+G+TFTK+V+E +A+  E+P+IFAL
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD---IKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFAL

Query:  SNPTSQFQCIAKEA
        SNPTSQ +C A++A
Subjt:  SNPTSQFQCIAKEA

A0A7J0G0D1 Malic enzyme1.5e-1850.44Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-------------------------------VVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALS
        +VLAGL+AALKL GGTLA+HK LFLG G+                               +  IKPTVLIG+SG+GRTFTKEV+E +A++ E+PI+ ALS
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-------------------------------VVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALS

Query:  NPTSQFQCIAKEA
        NPTSQ +C A+EA
Subjt:  NPTSQFQCIAKEA

SwissProt top hitse value%identityAlignment
P12628 NADP-dependent malic enzyme5.2e-1638.1Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGL+A+LKL GGTLADH  LFLG G+                                                                 V  IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIG+SG G+TFTKEV+E +A++ E+P+I ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

P36444 NADP-dependent malic enzyme, chloroplastic1.2e-1537.41Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGL++ALKL GG+LADHK LFLG G+                                                                 V  IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIG+SG G+TFTKEV+E +++  E+PII ALSNPTSQ +C A++A
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

P37223 NADP-dependent malic enzyme8.9e-1638.78Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGL+A+LKL GGTLADHK LFLG G+                                                                 V  IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG G+ FTKEV+E +A I  +P+I ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

P43279 NADP-dependent malic enzyme, chloroplastic1.2e-1536.73Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGL+++LK+ GGTLA+H  LFLG G+                                                                 V  IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG+G+TFTKEV+E +A+  ERP+IF+LSNPTS  +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

P51615 NADP-dependent malic enzyme1.2e-1538.1Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD------------------------------------IKP
        +VLAG+V+AL+L GGTLADHK LFLG G+                             +VD                                    IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD------------------------------------IKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIG+SG+G+ FTKEV+E +A+  E+P+I ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

Arabidopsis top hitse value%identityAlignment
AT1G79750.1 NADP-malic enzyme 47.0e-1635.37Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP
        +VLAGL+AAL+  GG+L+DH+ LFLG G+                                                                 V  IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------------------------------------------VVDIKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG+G+TFT++V+E +A + E+PII +LSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

AT2G13560.1 NAD-dependent malic enzyme 17.7e-0744.44Show/hide
Query:  VVDIKPTVLIGTSGMGRTFTKEVMEVI-AAIKERPIIFALSNPTSQFQCIAKEA
        V ++KP VL+G S +G  F+KEV+E +  +   RP IFA+SNPT   +C  ++A
Subjt:  VVDIKPTVLIGTSGMGRTFTKEVMEVI-AAIKERPIIFALSNPTSQFQCIAKEA

AT2G19900.1 NADP-malic enzyme 11.0e-1462.5Show/hide
Query:  VGKVVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        +G +  IKPTVLIG+SG+GR+FTKEV+E +++I ERP+I ALSNPT+Q +C A+EA
Subjt:  VGKVVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

AT5G11670.1 NADP-malic enzyme 21.0e-1459.38Show/hide
Query:  DHKLLFLGVGKVVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        +HK +   +G V  IKPTVLIGTSG+G+TFTKEV+E +A   E+P+I ALSNPTSQ +C A++A
Subjt:  DHKLLFLGVGKVVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA

AT5G25880.1 NADP-malic enzyme 39.1e-1637.41Show/hide
Query:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD------------------------------------IKP
        +VLAGL+AA K+ G +LADH  LFLG G+                             +VD                                    IKP
Subjt:  MVLAGLVAALKLDGGTLADHKLLFLGVGK-----------------------------VVD------------------------------------IKP

Query:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA
        TVLIGTSG+G+TFTKEV+E +A + E+P+I ALSNPTSQ +C A+EA
Subjt:  TVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTGCAGGGCTTGTTGCAGCTTTGAAGCTAGATGGTGGAACATTGGCTGACCATAAACTCTTATTCCTTGGTGTTGGAAAGGTTGTGGATATCAAACCAACAGT
GTTGATTGGGACATCAGGCATGGGAAGGACATTTACTAAAGAGGTTATGGAGGTCATAGCCGCCATTAAGGAGAGACCAATAATTTTTGCTCTTTCGAACCCCACTTCTC
AGTTTCAATGCATTGCTAAAGAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTGCAGGGCTTGTTGCAGCTTTGAAGCTAGATGGTGGAACATTGGCTGACCATAAACTCTTATTCCTTGGTGTTGGAAAGGTTGTGGATATCAAACCAACAGT
GTTGATTGGGACATCAGGCATGGGAAGGACATTTACTAAAGAGGTTATGGAGGTCATAGCCGCCATTAAGGAGAGACCAATAATTTTTGCTCTTTCGAACCCCACTTCTC
AGTTTCAATGCATTGCTAAAGAGGCTTAA
Protein sequenceShow/hide protein sequence
MVLAGLVAALKLDGGTLADHKLLFLGVGKVVDIKPTVLIGTSGMGRTFTKEVMEVIAAIKERPIIFALSNPTSQFQCIAKEA