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Clc06G09260 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09260
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCoiled-coil domain-containing protein 9-like
Genome locationClcChr06:11781163..11782997
RNA-Seq ExpressionClc06G09260
SyntenyClc06G09260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589907.1 hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia]8.6e-4675.16Show/hide
Query:  MASICLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPG
        MASICL SSKTLVLPSA YLP+ SSSSTSHSCCFGGCR SFP KPISTSNLI+  RRTGR          VV++  E++  + +   +    EWERPKPG
Subjt:  MASICLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPG

Query:  RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_022960823.1 uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata]8.6e-4675.16Show/hide
Query:  MASICLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPG
        MASICL SSKTLVLPSA YLPI SSSST+HSCCFGGCR SFP KPISTSNLI+  RRTGR          VV++  E++  + +   +    EWERPKPG
Subjt:  MASICLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPG

Query:  RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_022987895.1 uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima]1.7e-4675.66Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASICL SSKTL LPSA YLPISSSSTSHSCCFGGCR SFP KPI TSNLII  RRTGR          VV++  E++  + +   +    EWERPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_023530781.1 uncharacterized protein LOC111793229 [Cucurbita pepo subsp. pepo]8.6e-4673.68Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASICLFSSKTLVLPSA YLP+SSSSTSHS C  GCRCSFP +PI+ SNLIIG RRTGR         +VV++  E++  + +   +    EW+RPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_038879472.1 uncharacterized protein LOC120071334 [Benincasa hispida]7.5e-5078.29Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASI LFSSKTLVLPSATYLPISSSST+H+CCFGGCRCSFP KPISTSNLIIG RRTGRQ         VV++  E++  + +   +    EWERPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

TrEMBL top hitse value%identityAlignment
A0A6J1CVD6 uncharacterized protein LOC1110145601.6e-4572.67Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASICLFSSKTL LPSA YL ISSSSTSHSC FG CRCSFP KP+S S+L+IG RRTG+Q         VV++  +++  + +   +    EWERPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE

A0A6J1F0T5 uncharacterized protein LOC1114411002.7e-4573.03Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASIC FSSKTLVLPSA YLP+SSSSTSHS C  GCRCSFP +PI+ SNLIIG RRTGR         +VV++  E++  + +   +    EW+RPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1HA36 uncharacterized protein LOC111461515 isoform X14.2e-4675.16Show/hide
Query:  MASICLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPG
        MASICL SSKTLVLPSA YLPI SSSST+HSCCFGGCR SFP KPISTSNLI+  RRTGR          VV++  E++  + +   +    EWERPKPG
Subjt:  MASICLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPG

Query:  RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1HQ01 uncharacterized protein LOC1114656293.5e-4573.03Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASICLFSSKTLVLPSA YL +SSSSTSHS C  GCRCSFP +PI+ SNLIIG RRTGR         +VV++  E++  + +   +    EW+RPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1JI28 uncharacterized protein LOC111485300 isoform X18.4e-4775.66Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR
        MASICL SSKTL LPSA YLPISSSSTSHSCCFGGCR SFP KPI TSNLII  RRTGR          VV++  E++  + +   +    EWERPKPGR
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGR

Query:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  RPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17240.1 unknown protein5.1e-2049.35Show/hide
Query:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCS--FPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKP
        MAS+C  S++ L  PS   L   +  +S S    GC  S  F    +  S+    +RR   Q  V        KL     +  P         EWERPKP
Subjt:  MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCS--FPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKP

Query:  GRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        GRRPDIFP+FSPMKTPLPPP+P DPPEEDEEEEEKKEEEEENPD+E  ++PEKQ
Subjt:  GRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

AT3G24506.1 unknown protein1.5e-1675.81Show/hide
Query:  EWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEE-EENPDKENPDEPEKQ
        EWERPKPGRRPDIFP+FSPMK+PLPPP+P DPPEE+EEEEEKKEEE E++P+KE+ D+P+ +
Subjt:  EWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEE-EENPDKENPDEPEKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATATGCCTTTTCAGCTCTAAAACCCTAGTCTTACCCTCGGCGACCTACCTACCAATATCTTCTTCATCTACAAGCCATAGTTGCTGTTTTGGTGGCTGCAG
ATGCTCTTTCCCCATCAAGCCAATTTCTACTTCTAATTTGATTATTGGTACAAGGAGAACGGGGAGGCAGCACTGGGTAAATGTTTATTACACTGTTGTAGTTAAACTGA
GATTGGAGAAAGATATTGGCAGTCCTCAAGGTGTTTTCGTCGCAGTATGCAGGGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCC
ATGAAAACACCATTACCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGA
CGAGCCTGAGAAGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGATATGCCTTTTCAGCTCTAAAACCCTAGTCTTACCCTCGGCGACCTACCTACCAATATCTTCTTCATCTACAAGCCATAGTTGCTGTTTTGGTGGCTGCAG
ATGCTCTTTCCCCATCAAGCCAATTTCTACTTCTAATTTGATTATTGGTACAAGGAGAACGGGGAGGCAGCACTGGGTAAATGTTTATTACACTGTTGTAGTTAAACTGA
GATTGGAGAAAGATATTGGCAGTCCTCAAGGTGTTTTCGTCGCAGTATGCAGGGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCC
ATGAAAACACCATTACCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGA
CGAGCCTGAGAAGCAATAG
Protein sequenceShow/hide protein sequence
MASICLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGTRRTGRQHWVNVYYTVVVKLRLEKDIGSPQGVFVAVCREWERPKPGRRPDIFPQFSP
MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ