; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G09300 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09300
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:11963635..11964706
RNA-Seq ExpressionClc06G09300
SyntenyClc06G09300
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652951.1 hypothetical protein Csa_017733 [Cucumis sativus]8.9e-5672.22Show/hide
Query:  FSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWERRMC
        F   +  LPK    FPAVSEMDK+STFHFISSQ+EVQNGS MKNNNPN  +  S   T T+ ++Q ERV+K+E  +K GA HQRK +ENLEYCSW+RRMC
Subjt:  FSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWERRMC

Query:  LVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT
        LVAK MKELEK+DARNVDHA+DIEE+LHYYSRLTSPTFLEIVDKFF+DIF EFSA SSSQ T
Subjt:  LVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT

XP_008463389.1 PREDICTED: uncharacterized protein LOC103501556 [Cucumis melo]6.8e-7276.68Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPA-VSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGS
        MLLRATIS TKKFFRKT+ NFKSFFSN+YHRLPKA   FPA VSEMDKDSTFHFIS  +EVQNGSFMKNN PN A+H S   T+T+ E+QMERV+KNE  
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPA-VSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGS

Query:  IKIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQ
        +KIG  HQRK QENLEYC W+RRMCLVAK MKELEK+DARNVDH +DIEE+LHYYSRLTSPTFLE+VDKF +DIFAEFSA SSSQ T   R Q
Subjt:  IKIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQ

XP_011655505.1 uncharacterized protein LOC105435550 [Cucumis sativus]4.4e-7177.42Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI
        MLLRATIS TKKFFRKTL NFKSFFSN+YHRLPK    FPAVSEMDK+STFHFISSQ+EVQNGS MKNNNPN  +  S   T T+ ++Q ERV+K+E  +
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI

Query:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT
        K GA HQRK +ENLEYCSW+RRMCLVAK MKELEK+DARNVDHA+DIEE+LHYYSRLTSPTFLEIVDKFF+DIF EFSA SSSQ T
Subjt:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT

XP_022145016.1 uncharacterized protein LOC111014544 [Momordica charantia]1.4e-5666.67Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQME--RVDKNEG
        MLLRA+IS TKKFF+KT+CNFKSFFS SYHRLPK    F A   M+KDSTF FISSQKEVQ+G FMKNN  ++ALHF       ++E QME   VDK+ G
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQME--RVDKNEG

Query:  SI-KIGAIHQRKTQENLE------YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQ--QTLFP
        S+  IGA HQRK QEN +      Y   ERRMCLVAKK+KELEK+D+RNVDHA+DIEE+LHYYSRLT P +LEIVDKFF +IFAEFSANSSSQ   T+ P
Subjt:  SI-KIGAIHQRKTQENLE------YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQ--QTLFP

Query:  R
        R
Subjt:  R

XP_038880084.1 uncharacterized protein LOC120071772 [Benincasa hispida]3.0e-7580.63Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAA--FPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI
        M LRA+IS TKKFF+KTLCNFKSFFSNSYHRLP+AA  F AVSEMDKDSTFHFI SQ+EVQNGSFMKNNNPN ALHFSK    T+D+ + ERV+KNE  I
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAA--FPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI

Query:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEF-SANSSSQQTLFPR
        KI A HQRKTQENLE CSW+RRMCLVAKK+KELEKVDARNVDHAMDI+EVLHYYSRLTSPTFLEIVDKFF+DIFAEF SA+SSS+ + F R
Subjt:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEF-SANSSSQQTLFPR

TrEMBL top hitse value%identityAlignment
A0A0A0LTA6 Uncharacterized protein2.1e-7177.42Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI
        MLLRATIS TKKFFRKTL NFKSFFSN+YHRLPK    FPAVSEMDK+STFHFISSQ+EVQNGS MKNNNPN  +  S   T T+ ++Q ERV+K+E  +
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI

Query:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT
        K GA HQRK +ENLEYCSW+RRMCLVAK MKELEK+DARNVDHA+DIEE+LHYYSRLTSPTFLEIVDKFF+DIF EFSA SSSQ T
Subjt:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT

A0A1S3CJL1 uncharacterized protein LOC1035015563.3e-7276.68Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPA-VSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGS
        MLLRATIS TKKFFRKT+ NFKSFFSN+YHRLPKA   FPA VSEMDKDSTFHFIS  +EVQNGSFMKNN PN A+H S   T+T+ E+QMERV+KNE  
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPA-VSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGS

Query:  IKIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQ
        +KIG  HQRK QENLEYC W+RRMCLVAK MKELEK+DARNVDH +DIEE+LHYYSRLTSPTFLE+VDKF +DIFAEFSA SSSQ T   R Q
Subjt:  IKIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQ

A0A6J1CV44 uncharacterized protein LOC1110145446.7e-5766.67Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQME--RVDKNEG
        MLLRA+IS TKKFF+KT+CNFKSFFS SYHRLPK    F A   M+KDSTF FISSQKEVQ+G FMKNN  ++ALHF       ++E QME   VDK+ G
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQME--RVDKNEG

Query:  SI-KIGAIHQRKTQENLE------YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQ--QTLFP
        S+  IGA HQRK QEN +      Y   ERRMCLVAKK+KELEK+D+RNVDHA+DIEE+LHYYSRLT P +LEIVDKFF +IFAEFSANSSSQ   T+ P
Subjt:  SI-KIGAIHQRKTQENLE------YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQ--QTLFP

Query:  R
        R
Subjt:  R

A0A6J1H9I9 uncharacterized protein LOC1114613291.6e-5568.82Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI
        M+LRA+I+ TKKFF KTLCNFKSFFSN+Y RLPKA   F    EMDKDS              SFMKN+N N A+ FSK    T+DE QM++V+KNE SI
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI

Query:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT
        KIG  HQRKTQENL+    ERRMCLVAKKMKELEK+DAR+VDHA+DIEE+LHYYSRL+ PT+LEIVDKFFMDIFAEF ANSSSQQT
Subjt:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT

A0A6J1IF62 uncharacterized protein LOC1114722333.7e-5565.98Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAA--FPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI
        M L  +ISTTKKFF+KT+CNFKSFFSN+YHRLPKAA  F A  EM KD          EVQNGSF K+N  N+A+HFSK    TID+ QM+RV+KNE SI
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAA--FPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI

Query:  KIGAIHQRKTQENLE---------YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQ
        KIGA HQRK+QEN E         Y   ERR+CLVAKK+KELEK+DARNVDH++DIEE+LHYYSRLT PT+LEIVD FFMD+FAEF +NSSS Q
Subjt:  KIGAIHQRKTQENLE---------YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein4.2e-1139.56Show/hide
Query:  HQRKTQENLE-YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQWGN
        H++K ++  E +   ++R   +A+KMK+L  VD R+VDHA+D+ E L  YS + SP +L+IVD FF D++ EFS   +S +    R + G+
Subjt:  HQRKTQENLE-YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQWGN

AT3G16070.1 unknown protein2.3e-0930.41Show/hide
Query:  FRKTLCNFKSFFSNSYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNN-PNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENL
        F+KT     SFF  + H L      A  ++ +  T HF        + +F ++N+   D ++ S      I E+ +E  +  EG +K+    + K QE  
Subjt:  FRKTLCNFKSFFSNSYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNN-PNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENL

Query:  EY---------CSWERRMC-LVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFA
        +Y          S+  R C  + KK+ E+   +  +++ A+D+EE LHYYSR++SP +L IVDKFF D+++
Subjt:  EY---------CSWERRMC-LVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFA

AT3G24535.1 unknown protein3.2e-1128.18Show/hide
Query:  MLLRATISTTKKFFRKTLCNFKSFFSN--SYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI
        M+LR++IS T+K F+KT+ NFKSFF N  +YH+LPK                           + + N++PN  +    T++++    Q +   K+  + 
Subjt:  MLLRATISTTKKFFRKTLCNFKSFFSN--SYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSI

Query:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNV----DHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEF
           +  Q +  +  E    + ++ LV  K+KE+EK+   ++     +  D+ E LH YSRL    +L++V+ FFM+++++F
Subjt:  KIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNV----DHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTAAGAGCCACCATTTCAACAACCAAAAAATTCTTCAGAAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAATAGCTACCATAGGCTTCCCAAGGCGGCCTT
CCCCGCCGTCTCGGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAAGGAGGTGCAAAATGGAAGCTTTATGAAGAATAACAATCCCAATGATGCACTTC
ATTTTTCGAAGACTACTACTACTACGATCGACGAAGCCCAGATGGAAAGAGTTGATAAAAATGAAGGTAGCATCAAAATTGGAGCTATCCATCAAAGGAAAACCCAAGAA
AATTTGGAATATTGTAGTTGGGAGAGAAGAATGTGTTTGGTTGCGAAGAAAATGAAAGAGTTGGAAAAGGTAGATGCTAGAAATGTGGATCATGCAATGGATATTGAAGA
AGTTCTTCATTACTACTCTCGTCTCACTTCTCCAACATTTCTTGAGATTGTGGATAAATTCTTCATGGACATTTTTGCTGAATTTTCTGCTAATTCCTCTTCTCAACAAA
CTCTATTTCCTCGGAATCAGTGGGGGAATTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGAGAGATGATTATTACCAACTCCAAACCAAACCTCCTCATATTTATTAAAACATATTGTCTTCTTCCTTTTATTTCTCCCCTTTCTCTCCCCAAATAAAACAAAAT
CACAACTCAATGTTGCTAAGAGCCACCATTTCAACAACCAAAAAATTCTTCAGAAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAATAGCTACCATAGGCTTCCCAA
GGCGGCCTTCCCCGCCGTCTCGGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAAGGAGGTGCAAAATGGAAGCTTTATGAAGAATAACAATCCCAATG
ATGCACTTCATTTTTCGAAGACTACTACTACTACGATCGACGAAGCCCAGATGGAAAGAGTTGATAAAAATGAAGGTAGCATCAAAATTGGAGCTATCCATCAAAGGAAA
ACCCAAGAAAATTTGGAATATTGTAGTTGGGAGAGAAGAATGTGTTTGGTTGCGAAGAAAATGAAAGAGTTGGAAAAGGTAGATGCTAGAAATGTGGATCATGCAATGGA
TATTGAAGAAGTTCTTCATTACTACTCTCGTCTCACTTCTCCAACATTTCTTGAGATTGTGGATAAATTCTTCATGGACATTTTTGCTGAATTTTCTGCTAATTCCTCTT
CTCAACAAACTCTATTTCCTCGGAATCAGTGGGGGAATTGAATTCAACTTCATACATATCGATGTCGATACTAGAAGTTTCGAGCTTGCTTGATTTCTTTTGCAACCTAT
GAGTTGTAATGCAAATTTGATTGTGTGTGTTATTATGATTCATACATTTTAGTTTCATTTGAATGCCTATGAATGAATAATACATTATTAAATCATTTTTAATGTGATTT
TTGTTTTAAATGATTGTGTCGCCGCTCGAGTCTTGCACGTGTTCTTCATCGTTATTGTGGCCTTTTCGTGGACTTGATTTCCGACTTGCTTCTCTTGGTCTAATCTCACT
TCTCGGGCTCACTTGTGGCCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGAAGAGATTCTCGCATCGTTGTGATGTTTAG
Protein sequenceShow/hide protein sequence
MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQE
NLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQWGN