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Clc06G09590 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09590
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionbark storage protein A
Genome locationClcChr06:12649160..12650221
RNA-Seq ExpressionClc06G09590
SyntenyClc06G09590
Gene Ontology termsGO:0009116 - nucleoside metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589927.1 Bark storage protein A, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2178.67Show/hide
Query:  MERHLIL---VILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        MER ++L   VI+VLEISLM HAAVP++VLKQI +VNKNGPYLGIVVPNAFEMNPLLQSP+ VVD  LPHLDFSG
Subjt:  MERHLIL---VILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

XP_011660294.1 bark storage protein A [Cucumis sativus]1.4e-2177.92Show/hide
Query:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        ME  LILVIL     VLEISLMTHAAVP S++K I  VNKNGPYLGIVVPNAFEMNPLLQSP+ + DHNLPHLDFSG
Subjt:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

XP_022987774.1 bark storage protein A [Cucurbita maxima]2.6e-2083.33Show/hide
Query:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        +VI+VLEISLM HAAVP++VLKQI +VNKNGPYLGIVVPNAFEMNPLLQSP  VVD  LPHLDFSG
Subjt:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

XP_023516616.1 bark storage protein A [Cucurbita pepo subsp. pepo]2.0e-2083.33Show/hide
Query:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        +VI+VLEISLM HAAVP++VLKQI +VNKNGPYLGIVVPNAFEMNPLLQSP+ VVD  LPHLDFSG
Subjt:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

XP_038880578.1 bark storage protein A-like [Benincasa hispida]2.8e-2276.62Show/hide
Query:  MERHLI-----LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        ME HLI     +V++VLEISLMTHAAVP  ++KQI  VNKNGPYLGIVVPNAFEM PLLQSP+F+VDHNLPHLDFSG
Subjt:  MERHLI-----LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

TrEMBL top hitse value%identityAlignment
A0A0A0M0L4 PNP_UDP_1 domain-containing protein6.8e-2277.92Show/hide
Query:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        ME  LILVIL     VLEISLMTHAAVP S++K I  VNKNGPYLGIVVPNAFEMNPLLQSP+ + DHNLPHLDFSG
Subjt:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

A0A1S3CI60 bark storage protein A1.8e-1971.43Show/hide
Query:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        ME HLILVIL     + EISLMTHAAVP +++K I  VNKNGPYLGIVVPNAFEM+PLLQSP+ VVDH+LP+ DF G
Subjt:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

A0A5D3E1P1 Bark storage protein A3.7e-2072.73Show/hide
Query:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        ME HLILVIL     + EISLMTHAAVP +++K I  VNKNGPYLGIVVPNAFEM+PLLQSP+ VVDH+LP+ DFSG
Subjt:  MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

A0A6J1HA24 bark storage protein A2.2e-2081.82Show/hide
Query:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        +VI++LEISLM HAAVP++VLKQI +VNKNGPYLGIVVPNAFEMNPLLQSP+ VVD  LPHLDFSG
Subjt:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

A0A6J1JJT3 bark storage protein A1.3e-2083.33Show/hide
Query:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        +VI+VLEISLM HAAVP++VLKQI +VNKNGPYLGIVVPNAFEMNPLLQSP  VVD  LPHLDFSG
Subjt:  LVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28940.1 Phosphorylase superfamily protein4.2e-0839.71Show/hide
Query:  LILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG
        L++V+ V  +    +  +P + L++I  +N+ GPYLGIV PN +E+NPLL S  +    +LP +DF+G
Subjt:  LILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGCCTAATTCGACAAACGCAAGGCCTAATTCGACCGACGCAAGGCTTGCTTCGACCAACGCATGGCTGCTTCGACCAACGCATGGGAAGAGTGAATGCGGACAG
AAGGCAGAGTGTGTATTGGGAAGCGGCGGAAACTGGGAAGGATTGGGTTGGATTGTATTTGGCTTTGAGAGGAAACATGGAGAGGCATTTGATATTGGTGATATTGGTAT
TGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTCGAGTGTTTTGAAACAGATTGTTATAGTTAACAAAAATGGCCCTTATTTGGGCATAGTGGTGCCTAATGCCTTT
GAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTGGATTTTTCAGGTTTTCCAAATCATCATCTGTATGTTTTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGCCTAATTCGACAAACGCAAGGCCTAATTCGACCGACGCAAGGCTTGCTTCGACCAACGCATGGCTGCTTCGACCAACGCATGGGAAGAGTGAATGCGGACAG
AAGGCAGAGTGTGTATTGGGAAGCGGCGGAAACTGGGAAGGATTGGGTTGGATTGTATTTGGCTTTGAGAGGAAACATGGAGAGGCATTTGATATTGGTGATATTGGTAT
TGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTCGAGTGTTTTGAAACAGATTGTTATAGTTAACAAAAATGGCCCTTATTTGGGCATAGTGGTGCCTAATGCCTTT
GAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTGGATTTTTCAGGTTTTCCAAATCATCATCTGTATGTTTTTGTGTAA
Protein sequenceShow/hide protein sequence
MQGLIRQTQGLIRPTQGLLRPTHGCFDQRMGRVNADRRQSVYWEAAETGKDWVGLYLALRGNMERHLILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAF
EMNPLLQSPNFVVDHNLPHLDFSGFPNHHLYVFV