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Clc06G09610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:12663182..12670024
RNA-Seq ExpressionClc06G09610
SyntenyClc06G09610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887175.1 uncharacterized protein LOC120077362 [Benincasa hispida]4.4e-0745.45Show/hide
Query:  LEIMGLSIKVELGKHVLDLVHTNLTKVYARPTQVFLNTLCGKKTVHVLANESKKLGLLIQRLFMRNVEIDEMLQLLR
        +  +  S ++  GKHV DLVHT++      P + FL T C KK +H+LANESK LG+L Q +    +E+D+ML LLR
Subjt:  LEIMGLSIKVELGKHVLDLVHTNLTKVYARPTQVFLNTLCGKKTVHVLANESKKLGLLIQRLFMRNVEIDEMLQLLR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTAAACGACAAATTCGAAAAGAAATCTAAAGGTGTGGCTTTGCCTTCATCCACTGAAGAATGTGTGTCAGATCATGTAGAACTGAAAGATCCTTCCAAGCATAT
GTCAGATAATTCTGAAGTTGTTGCTGAGTCAATTGATTTTGATGATGTTAGTAAAGAAGTTGTATCTAAAGAAGATAGTTCTAGAAGTAAGTTACCAGAGAATGAGTTTG
ACCTCTTCGAGAATCCCGATGAATTTGAAAGTGAGATACTAAACACCAAAGGAAAGAAAAAGATCAGTGAGACTAATAGTTGTCCCCCTAAAATTGTTGATGACGAGAAG
AGCAACTCGGATGATGATTGGGAAGAGAAAGATGTTGGTTTGTTTGACAATGAAAATGATCTTATTTCCAAAGAAGACTGGCCTAGTAAACCCGAGCAAAGGAAGAATAA
ACCTCACCTAAAGTATATTCTAAACCGCAAAATTGAGGTTGAAAAGGAACTTTTCGAGCAAGTTCAGGACTACCTTGAGATCATGGGACTGTCAATTAAAGTTGAGCTTG
GAAAGCATGTTTTGGATCTTGTGCATACTAATTTGACTAAGGTTTATGCTAGACCAACTCAAGTTTTCCTTAATACTTTATGTGGTAAAAAGACCGTTCATGTTCTTGCC
AATGAATCTAAAAAGCTGGGACTTCTTATACAACGATTGTTTATGAGGAACGTTGAGATTGATGAGATGTTGCAGTTACTTCGTGGTGTAGGATCGCTAAGTGTCGAGGG
GAGGAAGAAGAAGGAGTCTAGGACAAATTGGAATAGATTTCTGGTCGAATTCGTGGTGCAATTGAAGCTGAAACCGAAGGGCGAAGTAAATTTGAATTATCGGACGAACG
AAGAGGAGTTAAGTTCTGGAATTTTGAGTGACACTGAAGGCGTGAGGGTGAGCAGCAAGATCAATCTTGCTAGGTGTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTAAACGACAAATTCGAAAAGAAATCTAAAGGTGTGGCTTTGCCTTCATCCACTGAAGAATGTGTGTCAGATCATGTAGAACTGAAAGATCCTTCCAAGCATAT
GTCAGATAATTCTGAAGTTGTTGCTGAGTCAATTGATTTTGATGATGTTAGTAAAGAAGTTGTATCTAAAGAAGATAGTTCTAGAAGTAAGTTACCAGAGAATGAGTTTG
ACCTCTTCGAGAATCCCGATGAATTTGAAAGTGAGATACTAAACACCAAAGGAAAGAAAAAGATCAGTGAGACTAATAGTTGTCCCCCTAAAATTGTTGATGACGAGAAG
AGCAACTCGGATGATGATTGGGAAGAGAAAGATGTTGGTTTGTTTGACAATGAAAATGATCTTATTTCCAAAGAAGACTGGCCTAGTAAACCCGAGCAAAGGAAGAATAA
ACCTCACCTAAAGTATATTCTAAACCGCAAAATTGAGGTTGAAAAGGAACTTTTCGAGCAAGTTCAGGACTACCTTGAGATCATGGGACTGTCAATTAAAGTTGAGCTTG
GAAAGCATGTTTTGGATCTTGTGCATACTAATTTGACTAAGGTTTATGCTAGACCAACTCAAGTTTTCCTTAATACTTTATGTGGTAAAAAGACCGTTCATGTTCTTGCC
AATGAATCTAAAAAGCTGGGACTTCTTATACAACGATTGTTTATGAGGAACGTTGAGATTGATGAGATGTTGCAGTTACTTCGTGGTGTAGGATCGCTAAGTGTCGAGGG
GAGGAAGAAGAAGGAGTCTAGGACAAATTGGAATAGATTTCTGGTCGAATTCGTGGTGCAATTGAAGCTGAAACCGAAGGGCGAAGTAAATTTGAATTATCGGACGAACG
AAGAGGAGTTAAGTTCTGGAATTTTGAGTGACACTGAAGGCGTGAGGGTGAGCAGCAAGATCAATCTTGCTAGGTGTCGCTAA
Protein sequenceShow/hide protein sequence
MSLNDKFEKKSKGVALPSSTEECVSDHVELKDPSKHMSDNSEVVAESIDFDDVSKEVVSKEDSSRSKLPENEFDLFENPDEFESEILNTKGKKKISETNSCPPKIVDDEK
SNSDDDWEEKDVGLFDNENDLISKEDWPSKPEQRKNKPHLKYILNRKIEVEKELFEQVQDYLEIMGLSIKVELGKHVLDLVHTNLTKVYARPTQVFLNTLCGKKTVHVLA
NESKKLGLLIQRLFMRNVEIDEMLQLLRGVGSLSVEGRKKKESRTNWNRFLVEFVVQLKLKPKGEVNLNYRTNEEELSSGILSDTEGVRVSSKINLARCR