; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G09690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontransmembrane protein 234 homolog
Genome locationClcChr06:12859951..12862752
RNA-Seq ExpressionClc06G09690
SyntenyClc06G09690
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018908 - Putative transmembrane family 234


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062621.1 transmembrane protein 234-like protein [Cucumis melo var. makuwa]1.9e-5193.44Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTLPFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIGLG
        +LLGEDTRVGYALFGTALIG G
Subjt:  MLLGEDTRVGYALFGTALIGLG

KAG6589933.1 Transmembrane protein 234-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7558.72Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL SSSN+T    K LSSLRRWLK+LSIWQYT+PFL+NLTASATFFAILS+APISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFG----------------------TALIGLGSSLVKQWESKV-----------------YVK-------------------HG
        AVFGMLLGE+TRVGYALFG                        ++   SS+   W   +                 ++K                    G
Subjt:  AVFGMLLGEDTRVGYALFG----------------------TALIGLGSSLVKQWESKV-----------------YVK-------------------HG

Query:  LGGTLDNAEHSIPVTTSRPKLAQASSEWCVGPVCFHTTSLSCPIICIPQT-------------EFPGTNLMRASKLPNKKLLFDFAPEPAITKSFLLV
        L GTL NA +SIPVT+S PK+A+A  EWCVGP+ FH  SLSCPIICIPQ              E PGT+LMRASKLPNKK LFDFAPEPA T+SF LV
Subjt:  LGGTLDNAEHSIPVTTSRPKLAQASSEWCVGPVCFHTTSLSCPIICIPQT-------------EFPGTNLMRASKLPNKKLLFDFAPEPAITKSFLLV

XP_016902925.1 PREDICTED: transmembrane protein 234 homolog [Cucumis melo]1.9e-5193.44Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTLPFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIGLG
        +LLGEDTRVGYALFGTALIG G
Subjt:  MLLGEDTRVGYALFGTALIGLG

XP_023516356.1 transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]3.2e-5191.27Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL SSSN+T    K LSSLRRWLKLLSIWQYTLPFL+NLTASATFFAILS+APISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFGTALIGLG
        AVFGMLLGE+TRVGYALFGTALIGLG
Subjt:  AVFGMLLGEDTRVGYALFGTALIGLG

XP_038879672.1 transmembrane protein 234 homolog [Benincasa hispida]3.1e-5496.72Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSSNSTK LSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILS+APISLAVP+TNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIGLG
        MLLGEDTRVGYALFGTALIGLG
Subjt:  MLLGEDTRVGYALFGTALIGLG

TrEMBL top hitse value%identityAlignment
A0A0A0LT65 Uncharacterized protein1.9e-4990.16Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATN LMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTLPF LNLTASATFF ILS+APISLAVPVTNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIGLG
        MLLGE TRVGYALFGT LIG G
Subjt:  MLLGEDTRVGYALFGTALIGLG

A0A1S4E4M5 transmembrane protein 234 homolog9.0e-5293.44Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTLPFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIGLG
        +LLGEDTRVGYALFGTALIG G
Subjt:  MLLGEDTRVGYALFGTALIGLG

A0A5A7VAD4 Transmembrane protein 234-like protein9.0e-5293.44Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTLPFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIGLG
        +LLGEDTRVGYALFGTALIG G
Subjt:  MLLGEDTRVGYALFGTALIGLG

A0A6J1HBE7 transmembrane protein 234 homolog3.4e-5190.48Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL SSSN+T    K LSSLRRWLKLLSIWQYT+PFL+NLTASATFFAILS+APISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFGTALIGLG
        AVFGMLLGE+TRVGYALFGTALIGLG
Subjt:  AVFGMLLGEDTRVGYALFGTALIGLG

A0A6J1JK46 transmembrane protein 234 homolog2.9e-5088.89Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+ WGATNALMRRGALLWDQAL SSSN+T    K LSS RRWLKLLSIWQYT+PFL+NLTASATFFAILS+APISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFGTALIGLG
        AVFGMLLGE+TRVGYALFGTALIGLG
Subjt:  AVFGMLLGEDTRVGYALFGTALIGLG

SwissProt top hitse value%identityAlignment
A0NGI1 Transmembrane protein 234 homolog8.5e-0732.52Show/hide
Query:  VEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLK---LLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGM
        V  ++ + ++WGATN  ++RG++ +++  + S      L  L  WL+   L++ WQY LP ++N   S  +   L    +SL VP+ N+ TF  TA+   
Subjt:  VEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLK---LLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGM

Query:  LLGEDTRVGYALF-GTALIGLGS
        LLGE  + G+ ++ G  L+ LG+
Subjt:  LLGEDTRVGYALF-GTALIGLGS

Q54ZG7 Transmembrane protein 234 homolog3.1e-0935.29Show/hide
Query:  DVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLL
        ++  ++ +G +WG TN L++RG+    + +S           +  ++ L +   YT+P L+NL+ S  FF  LS   ISL VP++N+ TF  T++ GMLL
Subjt:  DVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLL

Query:  GE
        GE
Subjt:  GE

Q8R1E7 Transmembrane protein 2341.0e-0429.31Show/hide
Query:  GDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGML
        G V  +V +  +WG T  L++R +      L      T     L+    L    +Y +PFLLN + S  ++  L++  ++LAVP+ N+     T + G +
Subjt:  GDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGML

Query:  LGEDTRVGYALFGTAL
        LGED     A+ G  L
Subjt:  LGEDTRVGYALFGTAL

Arabidopsis top hitse value%identityAlignment
AT5G19570.1 unknown protein9.6e-3863.28Show/hide
Query:  DVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST---------KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFA
        D++KMVA+GLVWGATNAL+RRGAL WD+  SSS+  +         K + +LR W+ LL  WQY++PFL+NL+ASATFFA+LS+APISLAVPVTNATTFA
Subjt:  DVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST---------KFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFA

Query:  ATAVFGMLLGEDTRVGYALFGTALIGLG
        ATA FG+LLGE+T++G AL GT+ I  G
Subjt:  ATAVFGMLLGEDTRVGYALFGTALIGLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGAGATGTAGAGAAAATGGTCGCGATCGGTCTCGTCTGGGGCGCCACCAACGCTCTGATGCGCCGTGGCGCCCTTCTCTGGGATCAAGCTCTCAGTTCTTCCTC
CAATTCAACCAAATTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCTATCTGGCAATACACTCTCCCCTTTTTGCTTAATCTCACCGCCTCCGCTACCTTCTTTG
CCATTCTAAGCAATGCCCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACTACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTAGGCGAGGACACTCGTGTCGGG
TACGCTCTGTTTGGTACTGCTCTCATTGGTTTGGGCAGCTCCTTAGTTAAGCAATGGGAAAGCAAGGTTTATGTGAAACATGGACTTGGTGGCACATTGGATAATGCTGA
GCACTCCATTCCAGTAACAACCTCTCGGCCTAAATTGGCGCAAGCTAGCAGTGAATGGTGCGTTGGTCCAGTTTGTTTTCACACGACCTCCTTGAGTTGCCCAATCATCT
GCATTCCACAAACTGAATTTCCCGGAACCAACTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAACTTCTCTTTGACTTTGCTCCCGAGCCTGCAATAACAAAATCATTC
TTGCTCGTCAAAGCTAACTACTGGATGAATTTGTATGAGAGACATGAAGATATGATCAACAAAAATGATATTATTTGTCACCTGTACTACTGTCCAAAACAAGCTGAAGG
CTATCCCCTAGTATTTTGGACTGACTATTTCCCCAGCTTATGA
mRNA sequenceShow/hide mRNA sequence
AGAGAGACTGGGGAAGAAGATGATAGGAGATGTAGAGAAAATGGTCGCGATCGGTCTCGTCTGGGGCGCCACCAACGCTCTGATGCGCCGTGGCGCCCTTCTCTGGGATC
AAGCTCTCAGTTCTTCCTCCAATTCAACCAAATTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCTATCTGGCAATACACTCTCCCCTTTTTGCTTAATCTCACC
GCCTCCGCTACCTTCTTTGCCATTCTAAGCAATGCCCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACTACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTAGG
CGAGGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGGTTTGGGCAGCTCCTTAGTTAAGCAATGGGAAAGCAAGGTTTATGTGAAACATGGACTTGGTG
GCACATTGGATAATGCTGAGCACTCCATTCCAGTAACAACCTCTCGGCCTAAATTGGCGCAAGCTAGCAGTGAATGGTGCGTTGGTCCAGTTTGTTTTCACACGACCTCC
TTGAGTTGCCCAATCATCTGCATTCCACAAACTGAATTTCCCGGAACCAACTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAACTTCTCTTTGACTTTGCTCCCGAGCC
TGCAATAACAAAATCATTCTTGCTCGTCAAAGCTAACTACTGGATGAATTTGTATGAGAGACATGAAGATATGATCAACAAAAATGATATTATTTGTCACCTGTACTACT
GTCCAAAACAAGCTGAAGGCTATCCCCTAGTATTTTGGACTGACTATTTCCCCAGCTTATGACCATGTTCTTTGAAATATTTGCATCAACTACAATGTGGTTAGACACAA
TCAAACAGACCAAAAATGCTATAGAGAAAGATTGAAACTTTGCCATTTCAATCCCAATATCATGAAACCTCTTTCTTTGTCTTTCTTTTCTGGGATTGAATTGGGACGTT
TCAAAAATTCAAGTTATTGATTGCTTT
Protein sequenceShow/hide protein sequence
MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVG
YALFGTALIGLGSSLVKQWESKVYVKHGLGGTLDNAEHSIPVTTSRPKLAQASSEWCVGPVCFHTTSLSCPIICIPQTEFPGTNLMRASKLPNKKLLFDFAPEPAITKSF
LLVKANYWMNLYERHEDMINKNDIICHLYYCPKQAEGYPLVFWTDYFPSL