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Clc06G09800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G09800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionninja-family protein mc410-like
Genome locationClcChr06:12982945..12983695
RNA-Seq ExpressionClc06G09800
SyntenyClc06G09800
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031307 - Ninja family
IPR032308 - Jas TPL-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145039.1 ninja-family protein mc410-like [Momordica charantia]6.1e-2887.14Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        GLAADVKFGGCGSFPNLPWVST  PGPNGRTI GVTYRYNANQI IVCACHGTHMS E+F+RHASEE  S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS

XP_023530655.1 ninja-family protein mc410-like isoform X2 [Cucurbita pepo subsp. pepo]6.8e-2769.89Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNSCFGLAEKLELLHVSTTHIACLYV
        GLAADVKFGGCGSFPNLPWVST  PGPNGRTI GVTYRYNAN I IVCACHG HMS EDFVRHA EE   C G   + E+     T+   L V
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNSCFGLAEKLELLHVSTTHIACLYV

XP_023921824.1 ninja-family protein mc410 [Quercus suber]5.2e-2782.35Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH
        G+AAD+KFGGCGS+PNLPWVST  PGPNGRTI GVTY+YN NQI IVCACHG+HMS E+FVRHASEEH
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH

XP_030952404.1 ninja-family protein mc410-like [Quercus lobata]6.8e-2782.35Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH
        G+AAD+KFGGCGS+PNLPWVST  PGPNGRTI GVTY+YN NQI IVCACHG+HMS E+FVRHASEEH
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH

XP_038879996.1 ninja-family protein mc410-like [Benincasa hispida]3.0e-2789.55Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE
        GLAADVKFGGCGSFPNLPWVST  PGPNGRTI GVTYRYNA+QI IVCACHG HMS EDFVRHASEE
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE

TrEMBL top hitse value%identityAlignment
A0A2N9GCB3 TDBD domain-containing protein8.6e-2885.29Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH
        G+AADVKFGGCGS+PNLPWVST  PGPNGRTI GVTYRYN NQI IVCACHGTHMS E+FV HASEEH
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH

A0A6J1CVE0 ninja-family protein mc410-like3.0e-2887.14Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        GLAADVKFGGCGSFPNLPWVST  PGPNGRTI GVTYRYNANQI IVCACHGTHMS E+F+RHASEE  S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS

A0A6J1KVE2 ninja-family protein mc410-like isoform X17.3e-2788.06Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE
        GLAADVKFGGCGSFPNLPWVST  PGPNGRTI GVTYRYNAN I IVCACHG HMS EDFVRHA EE
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE

A0A7N2KW68 Uncharacterized protein3.3e-2782.35Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH
        G+AAD+KFGGCGS+PNLPWVST  PGPNGRTI GVTY+YN NQI IVCACHG+HMS E+FVRHASEEH
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH

A0A7N2KWY4 Uncharacterized protein3.3e-2782.35Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH
        G+AAD+KFGGCGS+PNLPWVST  PGPNGRTI GVTY+YN NQI IVCACHG+HMS E+FVRHASEEH
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEH

SwissProt top hitse value%identityAlignment
B4FXN6 Ninja-family protein 78.1e-2367.16Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE
        G+A +VKFGG GS+P+LPWVST+  GPNGRTI GVTY++  N++ IVCACHGTHMS E+F+RHAS +
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE

B6TCE8 Ninja-family protein 88.1e-2367.16Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE
        G+A +VKFGG GS+P+LPWVST+  GPNGRTI GVTY++  N++ IVCACHGTHMS E+F+RHAS +
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE

Q53HY2 Ninja-family protein mc4101.2e-2677.14Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        GLAAD+KFGG GS+PNLPWVST  PGPNGRTI GVTYRY++ QI IVCACHG+HMS +DFVRHAS E  S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS

Q6AT41 Protein NINJA homolog 13.1e-2265.67Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE
        G+A +VKFGG GS+P+LPWVST   GPNGRTI GVTY++  N++ IVCACHGTHM+ E+F+RHAS +
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEE

Q9SV55 AFP homolog 22.1e-2678.57Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        G+AADVKFGG G+ PNLPWVST   GP+GRTI GVTYRYNANQI IVCACHG+HMS E+FVRHASEE+ S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS

Arabidopsis top hitse value%identityAlignment
AT3G07250.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein1.2e-0843.14Show/hide
Query:  FPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHA
        F  +P V++   GP G+T+ G  YRY+ ++I+I+C CHGT  S  +F+ HA
Subjt:  FPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHA

AT3G29575.1 ABI five binding protein 32.6e-0848Show/hide
Query:  NLPWVSTMCPGPNGRTIYGVTYRY-NANQITIVCACHGTHMSLEDFVRHA
        ++P+VST   GPNG+ I G  YRY    ++ IVC CHG+ +S  +FV+HA
Subjt:  NLPWVSTMCPGPNGRTIYGVTYRY-NANQITIVCACHGTHMSLEDFVRHA

AT4G28910.1 novel interactor of JAZ1.5e-2778.57Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        G+AADVKFGG G+ PNLPWVST   GP+GRTI GVTYRYNANQI IVCACHG+HMS E+FVRHASEE+ S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS

AT4G28910.2 novel interactor of JAZ1.5e-2778.57Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        G+AADVKFGG G+ PNLPWVST   GP+GRTI GVTYRYNANQI IVCACHG+HMS E+FVRHASEE+ S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS

AT4G28910.3 novel interactor of JAZ1.5e-2778.57Show/hide
Query:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS
        G+AADVKFGG G+ PNLPWVST   GP+GRTI GVTYRYNANQI IVCACHG+HMS E+FVRHASEE+ S
Subjt:  GLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTGAACGACCAGCTGGAGATAGGCCTTGCTGCCGATGTCAAGTTTGGAGGATGTGGTTCTTTCCCTAATCTACCTTGGGTTTCTACCATGTGTCCCGGTCCAAA
TGGTAGAACAATTTATGGTGTGACTTACAGATACAATGCAAACCAGATCACGATTGTCTGTGCTTGCCATGGTACCCACATGTCTCTAGAGGACTTCGTTCGACATGCTA
GTGAAGAGCACAATAGCTGTTTTGGCTTGGCAGAGAAGTTGGAACTTTTACACGTGTCGACAACCCACATTGCCTGTCTTTATGTGCAGCTTAAGATGTATTATCCTGTC
AGATTTTCTCTGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATCTGAACGACCAGCTGGAGATAGGCCTTGCTGCCGATGTCAAGTTTGGAGGATGTGGTTCTTTCCCTAATCTACCTTGGGTTTCTACCATGTGTCCCGGTCCAAA
TGGTAGAACAATTTATGGTGTGACTTACAGATACAATGCAAACCAGATCACGATTGTCTGTGCTTGCCATGGTACCCACATGTCTCTAGAGGACTTCGTTCGACATGCTA
GTGAAGAGCACAATAGCTGTTTTGGCTTGGCAGAGAAGTTGGAACTTTTACACGTGTCGACAACCCACATTGCCTGTCTTTATGTGCAGCTTAAGATGTATTATCCTGTC
AGATTTTCTCTGCTGTAA
Protein sequenceShow/hide protein sequence
MHLNDQLEIGLAADVKFGGCGSFPNLPWVSTMCPGPNGRTIYGVTYRYNANQITIVCACHGTHMSLEDFVRHASEEHNSCFGLAEKLELLHVSTTHIACLYVQLKMYYPV
RFSLL