CuGenDBv2

Gene ID	Clc06G10000
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	SWIM-type domain-containing protein
Genome location	ClcChr06:14003845..14008222
RNA-Seq Expression	Clc06G10000
Synteny	Clc06G10000
Gene Ontology terms	GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026169.1 uncharacterized protein E6C27_scaffold19G001250 [Cucumis melo var. makuwa]

5.4e-45

68.55

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSIE+QN+VR D SV ++VL E+IK+QYGY +KYRRVW+AK+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+ELLYWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]

3.2e-45

68.55

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSI++QN+VR DPSV V+VL E+IK+QYGY +KYRRVW+AK+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+EL YWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]

1.4e-45

69.35

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSIE+QN+VR DPSV V+VL E+IK+QYGY +KYRRVW+AK+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+EL YWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

XP_031741740.1 uncharacterized protein LOC116403936 [Cucumis sativus]

6.4e-46

68.55

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLRA +RK+HG+FEITKL E HSCLY  L Q HSQL SNFMS+++QNM++ DP++ V+VL E+IK+QYGYN+KY RVW+ KKKA +VVFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        WEKSY+EL YWLSVV+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

XP_031742190.1 uncharacterized protein LOC116404107 [Cucumis sativus]

2.4e-45

67.74

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLRA +RK+HG+FEITKL   HSCLY  L Q HSQLDSNFMS+++QNMV+ DP++ V VL E+IK+QYGY++KY RVW+AKKKA + VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        WEKSY+EL YWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BS22 uncharacterized protein LOC103492881

5.8e-45

68.55

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W   C WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSIE+QN+VR DPSV V+VL E+IK+QYGY +KYRRVW+AK+KA VVVFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY++L YWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

A0A5A7SLM1 Uncharacterized protein

2.6e-45

68.55

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSIE+QN+VR D SV ++VL E+IK+QYGY +KYRRVW+AK+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+ELLYWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

A0A5A7TN56 SWIM-type domain-containing protein

1.5e-45

68.55

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSI++QN+VR DPSV V+VL E+IK+QYGY +KYRRVW+AK+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+EL YWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

A0A5D3BS92 SWIM-type domain-containing protein

6.9e-46

69.35

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSIE+QN+VR DPSV V+VL E+IK+QYGY +KYRRVW+AK+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+EL YWLS V+HYNPGT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

A0A5D3C124 Uncharacterized protein

2.9e-44

66.94

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Query:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD
        + W  GC WRLR  RRK+HG+FEI++L   HSCLY  L Q HSQLDSNFMSIE+QN++R DPSV V+VL E+IK+QYGY +KYRRVW+ K+KA V VFGD
Subjt:  ESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGD

Query:  WEKSYSELLYWLSVVMHYNPGTKV
        W+KSY+EL YWLS V+HYN GT+V
Subjt:  WEKSYSELLYWLSVVMHYNPGTKV

SwissProt top hits

e value

%identity

Alignment

F4IFD0 Protein MAIN-LIKE 2

9.7e-05

39.29

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Query:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVRPL--DLKGSRLSFLWVK
        T+TL+DI +  GL ++G+PVIG  +     VCE YLG  P      G  +   W+K
Subjt:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVRPL--DLKGSRLSFLWVK

Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog

3.2e-08

48.21

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Query:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVR--PLDLKGSRLSFLWVK
        T+TLQD+ +  GL V+G  V GS  +NW  +CED LG R  P DL GS +S  W++
Subjt:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVR--PLDLKGSRLSFLWVK

Arabidopsis top hits

e value

%identity

Alignment

AT1G48120.1 hydrolases;protein serine/threonine phosphatases

2.3e-09

48.21

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Query:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVR--PLDLKGSRLSFLWVK
        T+TLQD+ +  GL V+G  V GS  +NW  +CED LG R  P DL GS +S  W++
Subjt:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVR--PLDLKGSRLSFLWVK

AT1G64255.1 MuDR family transposase

2.1e-10

33.63

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Query:  CRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGDWEKSYS
        C+W L A R K HG+ EI K    H+C  I          S F + E++  VR  P+  ++ L++  KK+ GY ++   V  AK+KA   VFGDW++S+ 
Subjt:  CRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQYGYNIKYRRVWEAKKKAFVVVFGDWEKSYS

Query:  ELLYWLSVVMHYN
        +    +S +   N
Subjt:  ELLYWLSVVMHYN

AT2G04865.1 Aminotransferase-like, plant mobile domain family protein

6.9e-06

39.29

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Query:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVRPL--DLKGSRLSFLWVK
        T+TL+DI +  GL ++G+PVIG  +     VCE YLG  P      G  +   W+K
Subjt:  TITLQDIVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVRPL--DLKGSRLSFLWVK

Sequences

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CDS sequence

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ATGCGACCATATGAAGACCACATCAAAGCCACAATATTGTGGTCACATCTAAGCAACAAATCAGTGAAGGTGATGGGACCACATCACTGCCGCAGCACAGAGAGCTGGGA
TGAAGGTTGTAGGTGGAGGTTGCGTGCTTGTCGACGCAAAACTCATGGGATGTTTGAAATTACTAAACTTGGAGAGAATCATTCATGTTTATACATAGAATTGGCACAAG
CCCATTCACAACTTGATTCCAATTTCATGAGTATTGAAGTTCAAAATATGGTTAGAGTTGATCCTAGTGTGCACGTGACCGTACTACAAGAAGTAATTAAAAAGCAGTAC
GGATATAACATCAAATATAGACGTGTGTGGGAAGCAAAGAAAAAAGCTTTCGTTGTAGTCTTCGGTGATTGGGAGAAATCATATTCAGAACTATTGTATTGGTTGAGTGT
TGTTATGCACTACAATCCTGGCACAAAAGTTCGATGTGGGATATGCAAGGGAGCAGAGCAAAACAAGCGTACTTGTCCACTCCGTCAGTTTTATTGGGGTTGCACAAATT
GGATTCATACAGTTAGACTAACATCTAATTACTACTCTAGTAGAGCGCTGGAGACTGGAGACCCACACATTTCATATGCTTGGTGGGGAAGCACAATTACACTACAGGAC
ATTGTAGTTCAATTTGGACTATCAGTGGAGGGAGAACCTGTGATTGGATCTTTGCATCATAATTGGAAACAGGTTTGTGAGGATTATTTAGGCGTCCGACCACTTGATCT
GAAAGGCTCAAGGTTGAGTTTCTTGTGGGTGAAGGTTCTCACTCACTGGGAGACGACTCTAAAAGTTCTCAGAATCCTTCTCTCAGAAGAGCTCGAAATGGAGGCTATTT
ATGCTTTTGCCCAGGCGGCTGTATCTACTTGTTCTCAACGTATGGTATTAACGCCTAGTCTCGACGCATGGGTTTCCACTTGTTCTCGCAGTAGCTTCGTCTCTTAG

mRNA sequence

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Protein sequence

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MRPYEDHIKATILWSHLSNKSVKVMGPHHCRSTESWDEGCRWRLRACRRKTHGMFEITKLGENHSCLYIELAQAHSQLDSNFMSIEVQNMVRVDPSVHVTVLQEVIKKQY
GYNIKYRRVWEAKKKAFVVVFGDWEKSYSELLYWLSVVMHYNPGTKVRCGICKGAEQNKRTCPLRQFYWGCTNWIHTVRLTSNYYSSRALETGDPHISYAWWGSTITLQD
IVVQFGLSVEGEPVIGSLHHNWKQVCEDYLGVRPLDLKGSRLSFLWVKVLTHWETTLKVLRILLSEELEMEAIYAFAQAAVSTCSQRMVLTPSLDAWVSTCSRSSFVS

Clc06G10000 (gene) of Watermelon (cordophanus) v2 genome