; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G10145 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10145
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein S19
Genome locationClcChr06:14734861..14735778
RNA-Seq ExpressionClc06G10145
SyntenyClc06G10145
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004645 - phosphorylase activity (molecular function)
InterPro domainsIPR002222 - Ribosomal protein S19/S15
IPR023575 - Ribosomal protein S19/S15, superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC22066.1 Alpha-1,4 glucan phosphorylase L-2 isozyme [Morus notabilis]5.2e-2664.55Show/hide
Query:  KRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRI
        KRRNEFMPRRSIWKGSFVDAFLLRMKKK   LLNRKI SRRSSIL EFVD      +GKT +RCKI E +V  +E +L        ++    +KVK KRI
Subjt:  KRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRI

Query:  WHEKEIRFRI
        WHEKEIRFR+
Subjt:  WHEKEIRFRI

YP_003587264.1 ribosomal protein S19 [Citrullus lanatus]1.7e-2177.22Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSIL EFVDS     +GKT VRCKI EGRV   F E  L R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

YP_003587364.1 ribosomal protein S19 [Cucurbita pepo]1.7e-2177.22Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSIL EFVDS     +GKT VRCKI EGRV   F E  L R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

YP_003587380.1 ribosomal protein S19 [Cucurbita pepo]1.7e-2177.22Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSIL EFVDS     +GKT VRCKI EGRV   F E  L R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

YP_009565405.1 ribosomal protein S19 [Morus notabilis]3.5e-2263.11Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRIWHEKEI
        MPRRSIWKGSFVDAFLLRMKKK   LLNRKI SRRSSIL EFVD      +GKT +RCKI E +V  +E +L        ++    +KVK KRIWHEKEI
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRIWHEKEI

Query:  RFR
        RFR
Subjt:  RFR

TrEMBL top hitse value%identityAlignment
A0A411GRV0 Ribosomal protein S191.7e-2263.11Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRIWHEKEI
        MPRRSIWKGSFVDAFLLRMKKK   LLNRKI SRRSSIL EFVD      +GKT +RCKI E +V  +E +L        ++    +KVK KRIWHEKEI
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRIWHEKEI

Query:  RFR
        RFR
Subjt:  RFR

D5I3D4 Ribosomal protein S198.4e-2277.22Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSIL EFVDS     +GKT VRCKI EGRV   F E  L R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

D5I3F0 Ribosomal protein S198.4e-2277.22Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSIL EFVDS     +GKT VRCKI EGRV   F E  L R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

D5I3G6 Ribosomal protein S198.4e-2277.22Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSIL EFVDS     +GKT VRCKI EGRV   F E  L R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

W9S278 Alpha-1,4 glucan phosphorylase2.5e-2664.55Show/hide
Query:  KRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRI
        KRRNEFMPRRSIWKGSFVDAFLLRMKKK   LLNRKI SRRSSIL EFVD      +GKT +RCKI E +V  +E +L        ++    +KVK KRI
Subjt:  KRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQIL--------DREKRRDKVKSKRI

Query:  WHEKEIRFRI
        WHEKEIRFR+
Subjt:  WHEKEIRFRI

SwissProt top hitse value%identityAlignment
A3PGL5 30S ribosomal protein S191.5e-0445.16Show/hide
Query:  RSIWKGSFVDAFLL-RMKKKRDPLLNR--KIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIE
        RS WKG FVD +LL + +K R+   N   KIWSRRS+IL +FV   +   +GK  V   + E
Subjt:  RSIWKGSFVDAFLL-RMKKKRDPLLNR--KIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIE

A8LM58 30S ribosomal protein S191.2e-0440Show/hide
Query:  RSIWKGSFVDAFLL-RMKKKRDPLLNR--KIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV
        RS+WKG FVDA++L + +K R+   N   KIWSRRS+IL +FV   +   +G+  +   + E  +
Subjt:  RSIWKGSFVDAFLL-RMKKKRDPLLNR--KIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV

P26874 Ribosomal protein S19, mitochondrial4.0e-0546.77Show/hide
Query:  RSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV
        RSIWKG FVD  L + KK     +  +IWSRRS IL +FV  +    +GK  V  KI E  V
Subjt:  RSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV

P27527 Ribosomal protein S19, mitochondrial2.8e-2272.15Show/hide
Query:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR
        MPRRSIWKGSFVDAFLLRMKKKRD L NRKIWSRRSSIL EFVD F    +GKT VRCKI EG+V   F E    R++R
Subjt:  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV--DFREQILDREKR

P39697 40S ribosomal protein S19, mitochondrial1.3e-1457.33Show/hide
Query:  KEMKKRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV
        +E +K+ N+ M  RS+WK  FVDAFL+   KK++  LNRKIWSRRS+IL E+VDS     +GKT VRCKI EG+V
Subjt:  KEMKKRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV

Arabidopsis top hitse value%identityAlignment
AT5G47320.1 ribosomal protein S198.9e-1657.33Show/hide
Query:  KEMKKRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV
        +E +K+ N+ M  RS+WK  FVDAFL+   KK++  LNRKIWSRRS+IL E+VDS     +GKT VRCKI EG+V
Subjt:  KEMKKRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGATCTGGCAATAGCACGCGACAAAGGACTCGAGATGACGACAACGAGCAACGACGCGACGACCGACGATTGAGAAAATGGCAACAGACCTGCTGGACCTGTTG
CTTTGCGTGTACAACGATGGTGGGGATCATGATTCGCGTGGATGGCGACGAGAACGGAGATGAAGGAAATGGAGAAGACGCATCTGCTGCCTACCGAACAAAAGAGATGA
AGAAAAGGAGAAATGAGTTCATGCCACGACGATCTATATGGAAAGGCAGTTTTGTTGATGCATTCCTATTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAATAGGAAA
ATTTGGTCACGTAGATCTTCGATTTTGCTAGAATTTGTTGATAGCTTTTATACGAATTTACATGGAAAAACTTCTGTTCGTTGTAAGATCATTGAAGGAAGGGTTGATTT
TCGAGAACAAATATTAGACCGGGAAAAAAGGAGGGATAAAGTCAAGTCTAAGCGTATATGGCACGAAAAGGAAATCCGATTTCGCATTTCATATTCACTCTTTTTTATTC
TCAAATCAAAAGTTTATAGTAAAATGAGATATCTGATTCTATCTGAATTAGACGAGCCGCCTTTAGCATTTCCATTTCGTGATTCAGATTCGGAGACGAATCCTTACATT
CCTAAGAATCCGAAGAGGGGATCTCTCTCGATCTCGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGATCTGGCAATAGCACGCGACAAAGGACTCGAGATGACGACAACGAGCAACGACGCGACGACCGACGATTGAGAAAATGGCAACAGACCTGCTGGACCTGTTG
CTTTGCGTGTACAACGATGGTGGGGATCATGATTCGCGTGGATGGCGACGAGAACGGAGATGAAGGAAATGGAGAAGACGCATCTGCTGCCTACCGAACAAAAGAGATGA
AGAAAAGGAGAAATGAGTTCATGCCACGACGATCTATATGGAAAGGCAGTTTTGTTGATGCATTCCTATTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAATAGGAAA
ATTTGGTCACGTAGATCTTCGATTTTGCTAGAATTTGTTGATAGCTTTTATACGAATTTACATGGAAAAACTTCTGTTCGTTGTAAGATCATTGAAGGAAGGGTTGATTT
TCGAGAACAAATATTAGACCGGGAAAAAAGGAGGGATAAAGTCAAGTCTAAGCGTATATGGCACGAAAAGGAAATCCGATTTCGCATTTCATATTCACTCTTTTTTATTC
TCAAATCAAAAGTTTATAGTAAAATGAGATATCTGATTCTATCTGAATTAGACGAGCCGCCTTTAGCATTTCCATTTCGTGATTCAGATTCGGAGACGAATCCTTACATT
CCTAAGAATCCGAAGAGGGGATCTCTCTCGATCTCGAATTGA
Protein sequenceShow/hide protein sequence
MSRSGNSTRQRTRDDDNEQRRDDRRLRKWQQTCWTCCFACTTMVGIMIRVDGDENGDEGNGEDASAAYRTKEMKKRRNEFMPRRSIWKGSFVDAFLLRMKKKRDPLLNRK
IWSRRSSILLEFVDSFYTNLHGKTSVRCKIIEGRVDFREQILDREKRRDKVKSKRIWHEKEIRFRISYSLFFILKSKVYSKMRYLILSELDEPPLAFPFRDSDSETNPYI
PKNPKRGSLSISN