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Clc06G10168 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10168
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein S7
Genome locationClcChr06:14906144..14906666
RNA-Seq ExpressionClc06G10168
SyntenyClc06G10168
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9660742.1 hypothetical protein SADUNF_SadunfMtG0004900 [Salix dunnii]7.7e-2374.7Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
        A+T  DVIKLMVDAIENIKPICEVE           +YRISLEKCSFAEIL+AY KRGI RKKRENLH  ASTNRSFAH RWW
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

MBA0790852.1 hypothetical protein [Gossypium harknessii]4.5e-2347.47Show/hide
Query:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------
        ASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPICEVE                          
Subjt:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------

Query:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
                   +YRISLEKCSFAEIL+AY KRGI RKKRENLH  +STNRSFAH RWW
Subjt:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

XP_021840260.1 uncharacterized protein LOC110780146 [Spinacia oleracea]3.8e-2246.54Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  AS NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

XP_023521058.1 uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]7.9e-3653.51Show/hide
Query:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV
        MER ELADKDGQ RLRNINF AS SKAASNCSEILSYMGGLD                                  AQT  DVIKLMVDA++NIKPICEV
Subjt:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV

Query:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
        E                                     +YRISLEKCSFAEIL+AY KRGI R+KRENLHR ASTNRSFAH RWW
Subjt:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

XP_038876459.1 ribosomal protein S7, mitochondrial [Benincasa hispida]1.3e-3352.43Show/hide
Query:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV
        MER ELADKDGQSRL NIN  AS SKAASNCSEILSYMGGLD                                  AQT  DVIKLMVDA+ENIKPICEV
Subjt:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV

Query:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
        +                                     +YRISLEK SF EIL+AY KRGI RKKRENLHR ASTNRSFAH RWW
Subjt:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

TrEMBL top hitse value%identityAlignment
A0A142BZ01 Ribosomal protein S72.7e-2157.8Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN
        AQT  DVIKLMVDA+ENIKPICEVE                                     +YRISLEKCSFAEIL+AY KRGI RKKRENLHR ASTN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

A0A7J9FZT5 Ribosomal_S7 domain-containing protein2.2e-2347.47Show/hide
Query:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------
        ASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPICEVE                          
Subjt:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------

Query:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
                   +YRISLEKCSFAEIL+AY KRGI RKKRENLH  +STNRSFAH RWW
Subjt:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

A0A803MBG4 Uncharacterized protein9.2e-2245.28Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVD+++NIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  AS NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

A0A803N7E0 Uncharacterized protein1.8e-2246.54Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  AS NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

A0A803N8Z9 Uncharacterized protein1.8e-2246.54Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  AS NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW

SwissProt top hitse value%identityAlignment
A7HM56 30S ribosomal protein S78.0e-0734.58Show/hide
Query:  LDAQTGCDVIKLMVDAIENIKPICEVE-------NYRISLE-----KCSFA----------------------EILNAYGKRGIGRKKRENLHRPASTNR
        L  +TG D I++   AIEN+KPI EV         Y++ +E     K + A                      E+LNAY   G   KKRE++H+ A  NR
Subjt:  LDAQTGCDVIKLMVDAIENIKPICEVE-------NYRISLE-----KCSFA----------------------EILNAYGKRGIGRKKRENLHRPASTNR

Query:  SFAHCRW
        +FAH RW
Subjt:  SFAHCRW

P26867 Ribosomal protein S7, mitochondrial6.8e-1441.9Show/hide
Query:  DVIKLMVDAIENIKPICEVENYR--------------------------------------ISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFA
        DVIKL+V+AIEN+KPICEV+  R                                      ISL++C +AEIL A  K GI RKKR++LH+ A  NRSF+
Subjt:  DVIKLMVDAIENIKPICEVENYR--------------------------------------ISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFA

Query:  HCRWW
        H RWW
Subjt:  HCRWW

P92557 Ribosomal protein S7, mitochondrial7.5e-2153.21Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN
        A+T  DVIKLMVDA+ENIKPICEV                                      +YRISLEKCSFAEIL+AY KRG  R+KRENLH  ASTN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

Q01902 Ribosomal protein S7, mitochondrial4.4e-2153.21Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN
        A+T  DVIKLMVDA++NIKPICEV                                      +YRISLEKCSFAEIL+AY KRGI RK+RENLH  ASTN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

Q9MF82 Ribosomal protein S7, mitochondrial4.8e-2051.38Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN
        A+T  DVIKLM+DA+ENIKPIC+VE                                     +YRISLEKC F EIL+AY KRGI RKKRENLH  AS N
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein5.3e-2253.21Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN
        A+T  DVIKLMVDA+ENIKPICEV                                      +YRISLEKCSFAEIL+AY KRG  R+KRENLH  ASTN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

ATMG01270.1 mitochondrial ribosomal protein S75.3e-2253.21Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN
        A+T  DVIKLMVDA+ENIKPICEV                                      +YRISLEKCSFAEIL+AY KRG  R+KRENLH  ASTN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTA
TATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAG
AGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTCCACCAATCGAAGTTTCGCGCAT
TGTAGATGGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTA
TATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAG
AGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTCCACCAATCGAAGTTTCGCGCAT
TGTAGATGGTGGTAA
Protein sequenceShow/hide protein sequence
MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLDAQTGCDVIKLMVDAIENIKPICEVENYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAH
CRWW