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Clc06G10190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:14931768..14932249
RNA-Seq ExpressionClc06G10190
SyntenyClc06G10190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7039585.1 unnamed protein product [Microthlaspi erraticum]1.2e-0577.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
KAD4385742.1 hypothetical protein E3N88_25911 [Mikania micrantha]1.2e-0577.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
KAF1856773.1 hypothetical protein Lal_00042261 [Lupinus albus]2.4e-0680.65Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAELIRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
KAG6467686.1 hypothetical protein ZIOFF_074416 [Zingiber officinale]1.2e-0577.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
KAG8363149.1 hypothetical protein BUALT_BualtMtG0001200 [Buddleja alternifolia]1.2e-0577.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
TrEMBL top hitse value%identityAlignment
A0A2K3PI15 Uncharacterized protein ycf685.8e-0677.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
A0A5N6N714 Uncharacterized protein ycf685.8e-0677.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
A0A6A5LAZ2 Uncharacterized protein ycf681.2e-0680.65Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAELIRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
A0A6D2JF37 Uncharacterized protein ycf685.8e-0677.42Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
        PH C +GNYNGKQGCKAE IRKDCL+ DC+L
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL
M0ZXY3 Uncharacterized protein ycf685.3e-0753.7Show/hide
Query:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL-------------DKHLKSAFYP
        PHMC +GNYNGKQGCKAE IRKDCL+ DC+L             D+H+    YP
Subjt:  PHMCTDGNYNGKQGCKAELIRKDCLNLDCAL-------------DKHLKSAFYP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTTATACGGCCACACATGTGCACCGATGGCAATTACAATGGGAAGCAAGGCTGTAAAGCGGAGCTAATCCGAAAAGATTGCCTCAATTTGGATTGTGCTCTTGA
TAAGCACTTGAAAAGTGCTTTCTATCCTCTCAAATTAAGAGAGTTTGTATTATATTTTATTTGTTTGCTAGTGGTTTTCAGCGCTAAAACCCGAATGCAACGTTCTAGAT
GCATCATAGCATTGCGGTGCCAAAATCCGACGCAACATTCTGAACGCATCACAGCGTCGCGGTGCTTGGACGGTGCTGTCGCAGCACTAAAACCCAAGAGCAACAATTTT
GAACACAACCCTAGCGCCGCGGCGCTAGTTTTCCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTTATACGGCCACACATGTGCACCGATGGCAATTACAATGGGAAGCAAGGCTGTAAAGCGGAGCTAATCCGAAAAGATTGCCTCAATTTGGATTGTGCTCTTGA
TAAGCACTTGAAAAGTGCTTTCTATCCTCTCAAATTAAGAGAGTTTGTATTATATTTTATTTGTTTGCTAGTGGTTTTCAGCGCTAAAACCCGAATGCAACGTTCTAGAT
GCATCATAGCATTGCGGTGCCAAAATCCGACGCAACATTCTGAACGCATCACAGCGTCGCGGTGCTTGGACGGTGCTGTCGCAGCACTAAAACCCAAGAGCAACAATTTT
GAACACAACCCTAGCGCCGCGGCGCTAGTTTTCCTTGAATGA
Protein sequenceShow/hide protein sequence
MALIRPHMCTDGNYNGKQGCKAELIRKDCLNLDCALDKHLKSAFYPLKLREFVLYFICLLVVFSAKTRMQRSRCIIALRCQNPTQHSERITASRCLDGAVAALKPKSNNF
EHNPSAAALVFLE