; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G10200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAltered inheritance of mitochondria protein
Genome locationClcChr06:14932546..14933395
RNA-Seq ExpressionClc06G10200
SyntenyClc06G10200
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0008289 - lipid binding (molecular function)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7039585.1 unnamed protein product [Microthlaspi erraticum]2.7e-2684.21Show/hide
Query:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEK
        GVKS DLRRNAKSEGSSLG YRRWGAKA G NGIRYP SPCRA WL SARVV CLVK YNERNP  VLLRHA KEK
Subjt:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEK

GEW78776.1 ribosomal protein S10 [Tanacetum cinerariifolium]8.8e-3080.46Show/hide
Query:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEVRQGAE
        GVK  ++RRNAKSEGSSLGPYRRWGAKA G N IRYP SPCRA WL SARVV CLVK YNERNP FVLLRHA KEKVFA EV +GAE
Subjt:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEVRQGAE

GEY54439.1 ribosomal protein S10 [Tanacetum cinerariifolium]1.3e-2878.16Show/hide
Query:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEVRQGAE
        GVKS ++RRNAKSEG SLGPYRRWGAKA G N IRYP SPCRA WL SA VV CLVK YNERNP FVLLRHA K+KVFA EV +GAE
Subjt:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEVRQGAE

GFA98036.1 ribosomal protein S10 [Tanacetum cinerariifolium]8.3e-2881.48Show/hide
Query:  VKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEV
        VKS ++RRNAKSEGSSLGPYRRWGAKA G N IRYP SPCRA WL SARVV CLVK YNERNP FVLLRHA KEKVFA E+
Subjt:  VKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEV

PNY14921.1 ribosomal protein S10 [Trifolium pratense]4.8e-3680.58Show/hide
Query:  RGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFA
        R G QVFF MTGRKG++G   GVKS DLRRNAKSEGSSLGPYRRW AKA G NGIRYP SPCRA WL SARVV CLVK YNERNP FVLLRHA KEKVFA
Subjt:  RGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFA

Query:  IEV
         EV
Subjt:  IEV

TrEMBL top hitse value%identityAlignment
A0A2I0HIY1 Uncharacterized protein ycf682.9e-2681.71Show/hide
Query:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEV
        GVKS DLRRNAKSEGSSLGPYRRWGAKA G NGIRYP     A WL SARVV CLVK YNERNP FVLLRHA KEKVFA EV
Subjt:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEV

A0A2K3PI15 Uncharacterized protein ycf682.3e-3680.58Show/hide
Query:  RGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFA
        R G QVFF MTGRKG++G   GVKS DLRRNAKSEGSSLGPYRRW AKA G NGIRYP SPCRA WL SARVV CLVK YNERNP FVLLRHA KEKVFA
Subjt:  RGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFA

Query:  IEV
         EV
Subjt:  IEV

A0A2N9GHW4 Uncharacterized protein ycf681.4e-3680.58Show/hide
Query:  RGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFA
        R G QVFF MTGR+G++G   GVKSRDLRRNAKSEGSSLGPYRRW AKA G NGIRYP SPCRA WL SARVV CLVK YNERNP FVLLRHA KEKVFA
Subjt:  RGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFA

Query:  IEV
         EV
Subjt:  IEV

A0A6D2JF37 Uncharacterized protein ycf681.3e-2684.21Show/hide
Query:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEK
        GVKS DLRRNAKSEGSSLG YRRWGAKA G NGIRYP SPCRA WL SARVV CLVK YNERNP  VLLRHA KEK
Subjt:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCRATWLLSARVVICLVKFYNERNPSFVLLRHATKEK

W9RSV7 Uncharacterized protein6.2e-2173.17Show/hide
Query:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSP-----CRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKV
        GVKS DLRRNAKSEGSSLGPYRRW AKA G NGIR P          A WL SARVV CLVK YNERNP FVLLRHA KE V
Subjt:  GVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSP-----CRATWLLSARVVICLVKFYNERNPSFVLLRHATKEKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCCACACTAGGATAGAGACACGGCCTGTACTCGCACGAGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCAAGCAATATCGCATGAGTGA
AGAAGGGCAATGTCGCTTTCGCAGTAAGACCAGGGGGGGAAGGCAAGTGTTCTTCGAAATGACTGGGCGTAAAGGGTACATAGGCGGTGAATCAGGGGTGAAATCCAGAG
ATCTACGAAGGAACGCCAAAAGCGAAGGTAGCTCTCTAGGTCCCTACCGACGCTGGGGTGCAAAAGCAAGGGGAACGAACGGGATTAGATACCCAAGTAGTCCATGCCGT
GCTACATGGCTGTTGTCAGCTCGTGTCGTGATATGTTTGGTGAAGTTCTATAACGAACGAAACCCTTCTTTTGTGTTGCTGAGACATGCGACTAAGGAGAAAGTCTTTGC
AATCGAAGTTCGCCAAGGAGCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCCACACTAGGATAGAGACACGGCCTGTACTCGCACGAGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCAAGCAATATCGCATGAGTGA
AGAAGGGCAATGTCGCTTTCGCAGTAAGACCAGGGGGGGAAGGCAAGTGTTCTTCGAAATGACTGGGCGTAAAGGGTACATAGGCGGTGAATCAGGGGTGAAATCCAGAG
ATCTACGAAGGAACGCCAAAAGCGAAGGTAGCTCTCTAGGTCCCTACCGACGCTGGGGTGCAAAAGCAAGGGGAACGAACGGGATTAGATACCCAAGTAGTCCATGCCGT
GCTACATGGCTGTTGTCAGCTCGTGTCGTGATATGTTTGGTGAAGTTCTATAACGAACGAAACCCTTCTTTTGTGTTGCTGAGACATGCGACTAAGGAGAAAGTCTTTGC
AATCGAAGTTCGCCAAGGAGCCGAGTGA
Protein sequenceShow/hide protein sequence
MISHTRIETRPVLARGGSSGESWTMGESPIKQYRMSEEGQCRFRSKTRGGRQVFFEMTGRKGYIGGESGVKSRDLRRNAKSEGSSLGPYRRWGAKARGTNGIRYPSSPCR
ATWLLSARVVICLVKFYNERNPSFVLLRHATKEKVFAIEVRQGAE