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Clc06G10480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationClcChr06:15600261..15602297
RNA-Seq ExpressionClc06G10480
SyntenyClc06G10480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A314ZL22 DBD_Tnp_Mut domain-containing protein8.2e-0440.82Show/hide
Query:  DSSYASSSNLKSPY--SSENDWEVCSYPVFKLETNLQAMTFQVEMRFSTKEVLKEAIKEYVVNGSYNVKIVKNDKSSNAALGRRC---LDASLMNARQ
        DS   S   L SPY  S E       +P F + ++L    F+  M F +KEVLK+A+K Y V G+Y VK VKNDK    A  + C   L AS M   Q
Subjt:  DSSYASSSNLKSPY--SSENDWEVCSYPVFKLETNLQAMTFQVEMRFSTKEVLKEAIKEYVVNGSYNVKIVKNDKSSNAALGRRC---LDASLMNARQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGAAAACTCTACCAACTTGCGTGAAGATAATCTAGCATTGAATGGGTCAAGTGACTCAAACATTGATATGAATTTGTTATATGATTTAAATGATGTAGATTT
TGATTCATCATATGCTTCTTCTTCTAATTTGAAATCTCCATATTCATCTGAGAATGATTGGGAAGTGTGTAGTTATCCTGTATTTAAACTGGAAACTAATTTGCAAGCTA
TGACTTTCCAAGTAGAAATGAGATTTAGCACTAAGGAGGTGCTAAAGGAAGCTATCAAAGAATATGTTGTAAATGGTTCGTATAATGTAAAAATAGTTAAGAATGATAAA
AGTAGCAACGCGGCGCTGGGAAGGCGCTGCCTCGACGCATCCTTGATGAATGCAAGACAGCGTCGCGGCGCTGGAACGGCGTTGCCGCGGCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTGAAAACTCTACCAACTTGCGTGAAGATAATCTAGCATTGAATGGGTCAAGTGACTCAAACATTGATATGAATTTGTTATATGATTTAAATGATGTAGATTT
TGATTCATCATATGCTTCTTCTTCTAATTTGAAATCTCCATATTCATCTGAGAATGATTGGGAAGTGTGTAGTTATCCTGTATTTAAACTGGAAACTAATTTGCAAGCTA
TGACTTTCCAAGTAGAAATGAGATTTAGCACTAAGGAGGTGCTAAAGGAAGCTATCAAAGAATATGTTGTAAATGGTTCGTATAATGTAAAAATAGTTAAGAATGATAAA
AGTAGCAACGCGGCGCTGGGAAGGCGCTGCCTCGACGCATCCTTGATGAATGCAAGACAGCGTCGCGGCGCTGGAACGGCGTTGCCGCGGCGCTAA
Protein sequenceShow/hide protein sequence
MFCENSTNLREDNLALNGSSDSNIDMNLLYDLNDVDFDSSYASSSNLKSPYSSENDWEVCSYPVFKLETNLQAMTFQVEMRFSTKEVLKEAIKEYVVNGSYNVKIVKNDK
SSNAALGRRCLDASLMNARQRRGAGTALPRR