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Clc06G10535 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10535
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4219 domain-containing protein
Genome locationClcChr06:15864305..15864640
RNA-Seq ExpressionClc06G10535
SyntenyClc06G10535
Gene Ontology termsNA
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.3e-2769.66Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+ G IKKLNTQNYKTW TCMKSYLQGQ+LW V GG +V PPED    KKWNIK GK  FAI+  IDEEMLEHI+I++ PK  W
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

KAA0037685.1 uncharacterized protein E6C27_scaffold1593G00060 [Cucumis melo var. makuwa]1.1e-2974.42Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPK
        MMG LQ+VG IKK NTQNYKTW TCMKSYLQGQ+LW V GG +V PPED  A KKWNIK GKVMFAI+  IDEEMLEHI+I++ PK
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPK

KAA0045163.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]6.5e-2767.42Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+VG IKKLNTQNYKTW TCMK YLQGQ+LW V GG +V P ED  A KKWN K  K MF I+  ID+EMLEHI+I++ PK AW
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

KAA0051808.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]1.7e-2766.29Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+V  IKKLN QNYKTW TCMKSYLQGQ+LW V G  +  PPED    KKWNIK GKV+F I+  +DEEMLEHI+I++ PK AW
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

XP_023758851.1 uncharacterized protein LOC111907314 [Lactuca sativa]2.0e-2362.22Show/hide
Query:  MGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVI--AFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MG LQ+VG IKKLN  NYKTW TCMKSYLQGQ+LW V GG +  PPE+ +  A +KW IK GK MFA++  I+EEMLEHI     PK AW
Subjt:  MGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVI--AFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

TrEMBL top hitse value%identityAlignment
A0A5A7T1U9 Integrase, catalytic core6.4e-2869.66Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+ G IKKLNTQNYKTW TCMKSYLQGQ+LW V GG +V PPED    KKWNIK GK  FAI+  IDEEMLEHI+I++ PK  W
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

A0A5A7TNQ2 UBN2_3 domain-containing protein3.2e-2767.42Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+VG IKKLNTQNYKTW TCMK YLQGQ+LW V GG +V P ED  A KKWN K  K MF I+  ID+EMLEHI+I++ PK AW
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

A0A5D3CHH6 DUF4219 domain-containing protein5.2e-3074.42Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPK
        MMG LQ+VG IKK NTQNYKTW TCMKSYLQGQ+LW V GG +V PPED  A KKWNIK GKVMFAI+  IDEEMLEHI+I++ PK
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPK

A0A5D3DCY7 UBN2_3 domain-containing protein8.3e-2866.29Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+V  IKKLN QNYKTW TCMKSYLQGQ+LW V G  +  PPED    KKWNIK GKV+F I+  +DEEMLEHI+I++ PK AW
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

A0A5D3E785 DUF4219 domain-containing protein3.6e-2368.54Show/hide
Query:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW
        MMG LQ+ G IKKLNTQ YK W TCMKS LQGQ+LW V GG KV P EDV A KK NIK  K MFAI+  IDEEMLEHI+I++ PK AW
Subjt:  MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGACACCTTCAAATTGTTGGTGAAATCAAGAAGCTCAATACTCAAAACTACAAAACATGGTTCACATGCATGAAGTCGTATCTCCAAGGCCAAAACTTGTGGGG
TGTTGCGGGAGGCATTAAGGTCAAGCCACCTGAAGATGTTATTGCTTTTAAGAAATGGAATATCAAGGAAGGTAAGGTCATGTTTGCAATTAGAATTATAATTGATGAAG
AAATGTTGGAGCACATCAATATAGTGCAGATGCCAAAGATAGCATGGGCATGTTTGCCTCACTTTTCTCAAAGAAAAATGATGCGAGATTTTAGTTTCCGGAGAACAAGC
TCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGACACCTTCAAATTGTTGGTGAAATCAAGAAGCTCAATACTCAAAACTACAAAACATGGTTCACATGCATGAAGTCGTATCTCCAAGGCCAAAACTTGTGGGG
TGTTGCGGGAGGCATTAAGGTCAAGCCACCTGAAGATGTTATTGCTTTTAAGAAATGGAATATCAAGGAAGGTAAGGTCATGTTTGCAATTAGAATTATAATTGATGAAG
AAATGTTGGAGCACATCAATATAGTGCAGATGCCAAAGATAGCATGGGCATGTTTGCCTCACTTTTCTCAAAGAAAAATGATGCGAGATTTTAGTTTCCGGAGAACAAGC
TCCTAA
Protein sequenceShow/hide protein sequence
MMGHLQIVGEIKKLNTQNYKTWFTCMKSYLQGQNLWGVAGGIKVKPPEDVIAFKKWNIKEGKVMFAIRIIIDEEMLEHINIVQMPKIAWACLPHFSQRKMMRDFSFRRTS
S