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Clc06G10640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:18254107..18258463
RNA-Seq ExpressionClc06G10640
SyntenyClc06G10640
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579726.1 hypothetical protein SDJN03_24174, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1483.67Show/hide
Query:  LQIAAPRTYHPAIVVSDNACELMERHLFIEIGRVNCLIRCTTFRVHEAE
        LQI+ PRTY+ AIVV  N CELMERHLFIEIGRVNC IRCTTFRVHEAE
Subjt:  LQIAAPRTYHPAIVVSDNACELMERHLFIEIGRVNCLIRCTTFRVHEAE
KGN61437.1 hypothetical protein Csa_006680 [Cucumis sativus]1.1e-2070.11Show/hide
Query:  SFFLFSFLSFPPFLS-ISNKILACLRLLLQFLLFSGSPLQIAAPRTYHPAIVVSDNACELMERHLFIEIGRVNCLIRCTTFRVHEAE
        SF LFS ++ PP LS +SNK+  CLRLLL FLLF  S L IA+ RTY+ AIVVS+N  ELMERH FI+IGRVNCLIRCTTFRV EAE
Subjt:  SFFLFSFLSFPPFLS-ISNKILACLRLLLQFLLFSGSPLQIAAPRTYHPAIVVSDNACELMERHLFIEIGRVNCLIRCTTFRVHEAE
TrEMBL top hitse value%identityAlignment
A0A0A0LL18 Uncharacterized protein5.5e-2170.11Show/hide
Query:  SFFLFSFLSFPPFLS-ISNKILACLRLLLQFLLFSGSPLQIAAPRTYHPAIVVSDNACELMERHLFIEIGRVNCLIRCTTFRVHEAE
        SF LFS ++ PP LS +SNK+  CLRLLL FLLF  S L IA+ RTY+ AIVVS+N  ELMERH FI+IGRVNCLIRCTTFRV EAE
Subjt:  SFFLFSFLSFPPFLS-ISNKILACLRLLLQFLLFSGSPLQIAAPRTYHPAIVVSDNACELMERHLFIEIGRVNCLIRCTTFRVHEAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCGGTGTCGGCGTCGGCGTCGTTGGCGTCTGGACTTCACGGACGACAGGATCCACGGATGACCGGTACTGGGAGTTTTTCGATGACTCAGGTGGGGTGTGTGGC
GAATGTTTGGGGTGTTGGCGGTGGCTGCAGCGGTAGATTAGTTGGCTCCTTTTTTCTGTTTTCCTTTCTCTCCTTTCCCCCATTTCTCTCCATCTCCAACAAGATTTTAG
CATGCCTTAGATTGCTCCTTCAGTTTCTACTCTTCTCCGGTTCTCCTCTACAAATTGCTGCACCACGTACATACCATCCTGCTATTGTTGTGTCCGACAATGCGTGTGAA
TTGATGGAGAGGCATCTTTTCATTGAAATTGGTCGTGTGAACTGTCTTATAAGATGTACTACTTTCAGGGTTCATGAAGCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCGGTGTCGGCGTCGGCGTCGTTGGCGTCTGGACTTCACGGACGACAGGATCCACGGATGACCGGTACTGGGAGTTTTTCGATGACTCAGGTGGGGTGTGTGGC
GAATGTTTGGGGTGTTGGCGGTGGCTGCAGCGGTAGATTAGTTGGCTCCTTTTTTCTGTTTTCCTTTCTCTCCTTTCCCCCATTTCTCTCCATCTCCAACAAGATTTTAG
CATGCCTTAGATTGCTCCTTCAGTTTCTACTCTTCTCCGGTTCTCCTCTACAAATTGCTGCACCACGTACATACCATCCTGCTATTGTTGTGTCCGACAATGCGTGTGAA
TTGATGGAGAGGCATCTTTTCATTGAAATTGGTCGTGTGAACTGTCTTATAAGATGTACTACTTTCAGGGTTCATGAAGCTGAATGA
Protein sequenceShow/hide protein sequence
MKAVSASASLASGLHGRQDPRMTGTGSFSMTQVGCVANVWGVGGGCSGRLVGSFFLFSFLSFPPFLSISNKILACLRLLLQFLLFSGSPLQIAAPRTYHPAIVVSDNACE
LMERHLFIEIGRVNCLIRCTTFRVHEAE