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Clc06G10680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:18440888..18446750
RNA-Seq ExpressionClc06G10680
SyntenyClc06G10680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017171.1 hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2669.91Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR-----SRGAAGKSSHGPSSQQLVR
        RAMKK R R QYSVLSPEA   A A AS SFNIADFYVDPPS+HVFP S S+     RA RRYNSFGGSTP++WRR     +  AA KSSHGP   QLVR
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR-----SRGAAGKSSHGPSSQQLVR

Query:  FRSQRILSCLIGQ
        FRSQRILSCL GQ
Subjt:  FRSQRILSCLIGQ

XP_022929072.1 uncharacterized protein LOC111435769 [Cucurbita moschata]3.7e-2670.91Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR--SRGAAGKSSHGPSSQQLVRFRS
        RAMKK R R QYSVLSPE    A A  S SFNIADFYVDPPS+HVFP S S+     RA RRYNSFGGSTP++WRR  S  AA KSSHGP   QLVRFRS
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR--SRGAAGKSSHGPSSQQLVRFRS

Query:  QRILSCLIGQ
        QRILSCL GQ
Subjt:  QRILSCLIGQ

XP_022969943.1 uncharacterized protein LOC111468990 [Cucurbita maxima]5.8e-2772.48Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR-SRGAAGKSSHGPSSQQLVRFRSQ
        RAMKK R R QYSVLSP  EA A A  S SFNIADFYVDPPS+HVFP S S+     RA RRYNSFGGSTP++WRR +  AAGKSSHGP   QLVRFRSQ
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR-SRGAAGKSSHGPSSQQLVRFRSQ

Query:  RILSCLIGQ
        RILSCL GQ
Subjt:  RILSCLIGQ

XP_023551320.1 uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo]3.7e-2669.64Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR----SRGAAGKSSHGPSSQQLVRF
        RAMKK R R QYSVLSPE    A A AS SFNIADFYVDPPS+HVFP S S+     RA RRYNSFGGSTP++WRR    +  AA KSSHGP   QLVRF
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR----SRGAAGKSSHGPSSQQLVRF

Query:  RSQRILSCLIGQ
        RSQRILSCL GQ
Subjt:  RSQRILSCLIGQ

XP_038875434.1 uncharacterized protein LOC120067892 [Benincasa hispida]3.4e-3580.77Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKSSHGPSSQQLVRFRSQRILSC
        RAMKKNR RRQYSVLSP+AE  AEA+AS+SFNIADFYVD PSSHVFP+S SD RA RRYNS+GGSTPQDWRR+ GA GKS HGP  QQLVRFRSQRIL C
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKSSHGPSSQQLVRFRSQRILSC

Query:  LIGQ
        L GQ
Subjt:  LIGQ

TrEMBL top hitse value%identityAlignment
A0A0A0LL24 Uncharacterized protein7.6e-2570.75Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQ-ASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGK-SSHG-PSSQQLVRFRSQRI
        RAMKKNR+RRQY+VLS +AE++AE + ASLSFNIADFYVDPPS        S+ RA RRYNS+ GST Q+WRRS  AAGK SSHG P  QQLVRFRSQRI
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQ-ASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGK-SSHG-PSSQQLVRFRSQRI

Query:  LSCLIG
        LSCL G
Subjt:  LSCLIG

A0A1S3B4K9 uncharacterized protein LOC1034857491.2e-2570.75Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQ-ASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKS-SHG-PSSQQLVRFRSQRI
        RAMKKNR+RRQY+VLS +AE+++E + ASLSFNIADFYVDPPS        S+ R  RRYNS+GGSTPQ+WRRS  AAGKS SHG P  QQLVRFRSQRI
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQ-ASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKS-SHG-PSSQQLVRFRSQRI

Query:  LSCLIG
        LSCL G
Subjt:  LSCLIG

A0A5A7ST27 Uncharacterized protein1.2e-2570.75Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQ-ASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKS-SHG-PSSQQLVRFRSQRI
        RAMKKNR+RRQY+VLS +AE+++E + ASLSFNIADFYVDPPS        S+ R  RRYNS+GGSTPQ+WRRS  AAGKS SHG P  QQLVRFRSQRI
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQ-ASLSFNIADFYVDPPSSHVFPNSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKS-SHG-PSSQQLVRFRSQRI

Query:  LSCLIG
        LSCL G
Subjt:  LSCLIG

A0A6J1ELR2 uncharacterized protein LOC1114357691.8e-2670.91Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR--SRGAAGKSSHGPSSQQLVRFRS
        RAMKK R R QYSVLSPE    A A  S SFNIADFYVDPPS+HVFP S S+     RA RRYNSFGGSTP++WRR  S  AA KSSHGP   QLVRFRS
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR--SRGAAGKSSHGPSSQQLVRFRS

Query:  QRILSCLIGQ
        QRILSCL GQ
Subjt:  QRILSCLIGQ

A0A6J1I2E5 uncharacterized protein LOC1114689902.8e-2772.48Show/hide
Query:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR-SRGAAGKSSHGPSSQQLVRFRSQ
        RAMKK R R QYSVLSP  EA A A  S SFNIADFYVDPPS+HVFP S S+     RA RRYNSFGGSTP++WRR +  AAGKSSHGP   QLVRFRSQ
Subjt:  RAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFPNSNSD----ARAPRRYNSFGGSTPQDWRR-SRGAAGKSSHGPSSQQLVRFRSQ

Query:  RILSCLIGQ
        RILSCL GQ
Subjt:  RILSCLIGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGGAGGAGGAAATCAACAAAGCAGCCTGGCGCCGCGGCGCTACCAATGGTGACGGACGAGAACTATGCGTTGGCAACCTGTGGACGCATTGACAACTCTTCAAC
GCAGGGAAAGTTGGGTGGGAATGAAAAAAAAGAGGAGCGACTGGAAGGTCGATTGGCATTGAGGTGGATGGCAGTTGCGAGAGCAATGAAGAAAAATAGAAAGAGAAGGC
AATATTCAGTGCTTTCCCCAGAAGCAGAAGCAAAAGCAGAAGCACAAGCTTCTCTATCTTTTAACATTGCTGATTTCTACGTGGATCCGCCTTCCAGCCATGTCTTTCCC
AATTCAAACTCCGACGCCAGGGCTCCCCGGAGATACAACTCATTCGGCGGGTCTACGCCTCAGGACTGGCGGAGGAGTCGCGGAGCCGCCGGGAAGTCCAGTCATGGGCC
ATCGTCGCAGCAGCTTGTTAGGTTCAGAAGCCAGCGGATTCTGTCGTGCTTGATTGGGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGGAGGAGGAAATCAACAAAGCAGCCTGGCGCCGCGGCGCTACCAATGGTGACGGACGAGAACTATGCGTTGGCAACCTGTGGACGCATTGACAACTCTTCAAC
GCAGGGAAAGTTGGGTGGGAATGAAAAAAAAGAGGAGCGACTGGAAGGTCGATTGGCATTGAGGTGGATGGCAGTTGCGAGAGCAATGAAGAAAAATAGAAAGAGAAGGC
AATATTCAGTGCTTTCCCCAGAAGCAGAAGCAAAAGCAGAAGCACAAGCTTCTCTATCTTTTAACATTGCTGATTTCTACGTGGATCCGCCTTCCAGCCATGTCTTTCCC
AATTCAAACTCCGACGCCAGGGCTCCCCGGAGATACAACTCATTCGGCGGGTCTACGCCTCAGGACTGGCGGAGGAGTCGCGGAGCCGCCGGGAAGTCCAGTCATGGGCC
ATCGTCGCAGCAGCTTGTTAGGTTCAGAAGCCAGCGGATTCTGTCGTGCTTGATTGGGCAGTGA
Protein sequenceShow/hide protein sequence
MKWRRKSTKQPGAAALPMVTDENYALATCGRIDNSSTQGKLGGNEKKEERLEGRLALRWMAVARAMKKNRKRRQYSVLSPEAEAKAEAQASLSFNIADFYVDPPSSHVFP
NSNSDARAPRRYNSFGGSTPQDWRRSRGAAGKSSHGPSSQQLVRFRSQRILSCLIGQ