; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G10908 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10908
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAcetohydroxy-acid synthase small subunit
Genome locationClcChr06:18616452..18616967
RNA-Seq ExpressionClc06G10908
SyntenyClc06G10908
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0006811 - ion transport (biological process)
GO:0016053 - organic acid biosynthetic process (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:1901566 - organonitrogen compound biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036035.1 putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa]1.3e-1843.41Show/hide
Query:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH
        +++E+  C +  S YCIW EE S   EDVEA  ++  S S LRW    I  LL+   +  F K    D G  RISKF A SG  L C  WP  GG F I 
Subjt:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH

Query:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW
          SG +QQGW S  +ML +F+ K +Y +W
Subjt:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW

KAA0063979.1 hypothetical protein E6C27_scaffold616G001380 [Cucumis melo var. makuwa]7.8e-1140.7Show/hide
Query:  IEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCV
        +EV S  +  S YCIW ++  FH EDV+ ++ L +S + LRWFI ++L+L+Q   + +F KN  D  G TR++KF       +RCV
Subjt:  IEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCV

TYJ98411.1 nucleotide binding protein [Cucumis melo var. makuwa]1.4e-1551.35Show/hide
Query:  EVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKF
        +VE C V   PYCIWF++  FH EDVEA++ L LS++  RWF+K I E L+GP N +  +N +DD+G TR+ KF
Subjt:  EVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKF

TYJ98834.1 putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa]1.3e-1843.41Show/hide
Query:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH
        +++E+  C +  S YCIW EE S   EDVEA  ++  S S LRW    I  LL+   +  F K    D G  RISKF A SG  L C  WP  GG F I 
Subjt:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH

Query:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW
          SG +QQGW S  +ML +F+ K +Y +W
Subjt:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW

TYK02777.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]9.2e-1244.3Show/hide
Query:  SCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYL
        SC +    YCIW E+G FH EDV+ ++ + LS + L WF  SI  L++ P  ++F K+  DD G+TR+SKF   SG +L
Subjt:  SCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYL

TrEMBL top hitse value%identityAlignment
A0A5A7T3H6 Putative 3,4-dihydroxy-2-butanone kinase isoform X26.4e-1943.41Show/hide
Query:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH
        +++E+  C +  S YCIW EE S   EDVEA  ++  S S LRW    I  LL+   +  F K    D G  RISKF A SG  L C  WP  GG F I 
Subjt:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH

Query:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW
          SG +QQGW S  +ML +F+ K +Y +W
Subjt:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW

A0A5A7VEL7 Uncharacterized protein3.8e-1140.7Show/hide
Query:  IEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCV
        +EV S  +  S YCIW ++  FH EDV+ ++ L +S + LRWFI ++L+L+Q   + +F KN  D  G TR++KF       +RCV
Subjt:  IEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCV

A0A5D3BIA6 Nucleotide binding protein6.6e-1651.35Show/hide
Query:  EVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKF
        +VE C V   PYCIWF++  FH EDVEA++ L LS++  RWF+K I E L+GP N +  +N +DD+G TR+ KF
Subjt:  EVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKF

A0A5D3BIE8 Putative 3,4-dihydroxy-2-butanone kinase isoform X16.4e-1943.41Show/hide
Query:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH
        +++E+  C +  S YCIW EE S   EDVEA  ++  S S LRW    I  LL+   +  F K    D G  RISKF A SG  L C  WP  GG F I 
Subjt:  NAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIH

Query:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW
          SG +QQGW S  +ML +F+ K +Y +W
Subjt:  IHSGVSQQGWKSFPKMLNEFLIKYEYTQW

A0A5D3BTI0 Transposon TX1 uncharacterized4.4e-1244.3Show/hide
Query:  SCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYL
        SC +    YCIW E+G FH EDV+ ++ + LS + L WF  SI  L++ P  ++F K+  DD G+TR+SKF   SG +L
Subjt:  SCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATGCTATAGAGGTGGAAAGTTGTAATGTTCATGGTTCGCCTTACTGTATTTGGTTTGAAGAAGGTTCTTTCCATTTTGAGGACGTGGAAGCCAAAGAAACTCT
ACCGTTGTCAAACTCCCATTTGAGATGGTTTATCAAATCCATATTAGAACTGCTCCAAGGCCCTCCCAATAGGTACTTCTTCAAAAATGATTGGGACGATTATGGCGTGA
CAAGAATTTCAAAATTTATAGCTGACTCAGGATGCTATCTAAGATGCGTAATATGGCCAGCAATGGGGGGTCGATTCTTCATTCATATCCATTCGGGAGTCTCTCAACAG
GGGTGGAAATCCTTTCCGAAAATGTTGAATGAGTTTTTGATAAAATATGAATACACTCAATGGAAAAAGCAACAACTCCCTAAAACAAAACCCATCAATCAGAGACCGAC
AGGGGTCGAAATACTATCCGTTCAGGTTCAGGGCCCAAGCTATGCAGATAAGGTGAAGTTAAAAGATCAACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATGCTATAGAGGTGGAAAGTTGTAATGTTCATGGTTCGCCTTACTGTATTTGGTTTGAAGAAGGTTCTTTCCATTTTGAGGACGTGGAAGCCAAAGAAACTCT
ACCGTTGTCAAACTCCCATTTGAGATGGTTTATCAAATCCATATTAGAACTGCTCCAAGGCCCTCCCAATAGGTACTTCTTCAAAAATGATTGGGACGATTATGGCGTGA
CAAGAATTTCAAAATTTATAGCTGACTCAGGATGCTATCTAAGATGCGTAATATGGCCAGCAATGGGGGGTCGATTCTTCATTCATATCCATTCGGGAGTCTCTCAACAG
GGGTGGAAATCCTTTCCGAAAATGTTGAATGAGTTTTTGATAAAATATGAATACACTCAATGGAAAAAGCAACAACTCCCTAAAACAAAACCCATCAATCAGAGACCGAC
AGGGGTCGAAATACTATCCGTTCAGGTTCAGGGCCCAAGCTATGCAGATAAGGTGAAGTTAAAAGATCAACGCTGA
Protein sequenceShow/hide protein sequence
MTNAIEVESCNVHGSPYCIWFEEGSFHFEDVEAKETLPLSNSHLRWFIKSILELLQGPPNRYFFKNDWDDYGVTRISKFIADSGCYLRCVIWPAMGGRFFIHIHSGVSQQ
GWKSFPKMLNEFLIKYEYTQWKKQQLPKTKPINQRPTGVEILSVQVQGPSYADKVKLKDQR