; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G10990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G10990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin-regulated gene involved in organ size
Genome locationClcChr06:19269110..19270091
RNA-Seq ExpressionClc06G10990
SyntenyClc06G10990
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037468 - ARGOS/ARL/OSR1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601768.1 hypothetical protein SDJN03_07001, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3259.62Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQR--------TQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLC
        M+LG  + +  GVPN DDF+++             HH YF+  A S  +  SS++T         AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+ 
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQR--------TQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLC

Query:  LAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        LAASLLILPL+LPPLP PPLMLLLLLPIGILGMLMVLAFMPSND K+I  SSHTYM
Subjt:  LAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

KGN61450.1 hypothetical protein Csa_006551 [Cucumis sativus]4.4e-5585.14Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLIL
        MTLGFQEAEKRGVPN + FL+L Q +Q+H Y MDG +SNNSN+ SDSTNRI+YY  AAAAQ RRK+EY RSLSQG+PRRLVPAASYLGVLLCLAASLLIL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLIL

Query:  PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK+ITSSSHTYM
Subjt:  PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

XP_022974015.1 ARGOS-like protein [Cucurbita maxima]3.3e-3462.25Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQRTQ---HHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASL
        M+LG  +A+  GVPN DDF ++        HH YF+  A S  +  SS++T         AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+CLAASL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQRTQ---HHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASL

Query:  LILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        LILPL+LPPLPPPPLMLLLLLPIGI+GMLMVLAFMPSN  K+ITSS  TYM
Subjt:  LILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

XP_023514167.1 ARGOS-like protein [Cucurbita pepo subsp. pepo]2.8e-3359.38Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQRTQ------------HHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLG
        M+LG  + +  GVPN DDF+++Q                HH YF+  A S  +  SS +        + AA Q +R +EYTRSLSQG+ RRLVPAA+YL 
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQRTQ------------HHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLG

Query:  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        VL+CLAASLLILPL+LPPLP PPLMLLLLLPIGILGMLMVLAFMPSND K+I SSSHTYM
Subjt:  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

XP_038875191.1 ARGOS-like protein [Benincasa hispida]3.1e-5687.33Show/hide
Query:  MTLGFQE-AEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLI
        M+LGFQE AEK+GVPN DDFLNLQQRTQH+ + MDG T NNSN+SSDSTNRISYY   AAAQHRRK+EY+RSLSQG+PRRLVPAASYLGVLLCLAASLLI
Subjt:  MTLGFQE-AEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLI

Query:  LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEIT-SSSHTYM
        LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK IT SSSHTYM
Subjt:  LPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEIT-SSSHTYM

TrEMBL top hitse value%identityAlignment
A0A061ERG1 Auxin-regulated gene involved in organ size5.4e-1463.33Show/hide
Query:  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        R+K+EY RS SQG  RRL+P + +    L +L+CL ASLLILPL+LPPLPPPP  LLLLLPIGIL +LM+LAFMPSN  ++IT   +TYM
Subjt:  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

A0A0A0LHQ4 Uncharacterized protein2.2e-5585.14Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLIL
        MTLGFQEAEKRGVPN + FL+L Q +Q+H Y MDG +SNNSN+ SDSTNRI+YY  AAAAQ RRK+EY RSLSQG+PRRLVPAASYLGVLLCLAASLLIL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLIL

Query:  PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK+ITSSSHTYM
Subjt:  PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

A0A2C9VY78 Uncharacterized protein9.1e-1462.22Show/hide
Query:  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        ++K+EY RSLSQGS R+L PA+ +    L +L+CL ASLLILPL+LPPLPPPP  LLLLLPIGIL +LM+LAFMP+N  ++IT   +TY+
Subjt:  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

A0A6J1EU41 ARGOS-like protein4.1e-3059.46Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLIL
        M+LG  + +  GVPN DDF+++     HH            +++ +      Y+   AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+CLAASLLIL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLIL

Query:  PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        PL+LPPLP PPLMLLLLLPIGILGMLMVLAFMPSND K+I SSSHT M
Subjt:  PLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

A0A6J1ICV1 ARGOS-like protein1.6e-3462.25Show/hide
Query:  MTLGFQEAEKRGVPNRDDFLNLQQRTQ---HHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASL
        M+LG  +A+  GVPN DDF ++        HH YF+  A S  +  SS++T         AA Q +R +EYTRSLSQG+ RRLVPAA+YL VL+CLAASL
Subjt:  MTLGFQEAEKRGVPNRDDFLNLQQRTQ---HHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASL

Query:  LILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        LILPL+LPPLPPPPLMLLLLLPIGI+GMLMVLAFMPSN  K+ITSS  TYM
Subjt:  LILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.5e-0841.79Show/hide
Query:  RGVPN-RDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY-----LGVLLCLAASLLILPLVL
        R  PN ++D +N+Q+R  ++   MD     NS  + +           A      K E  R+ S  S +RL+  A+Y     L +L+ L ASLLILPLVL
Subjt:  RGVPN-RDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY-----LGVLLCLAASLLILPLVL

Query:  PPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK
        PPLPPPP M LLL+PIGI+ +L++LAFMPS+ ++
Subjt:  PPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE5.5e-0840.74Show/hide
Query:  DFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLM
        D +N+Q    ++   MD   +N  N S  S            +  + K E  RS S    R ++PA  +    L +L+ L ASLLILPLVLPPLPPPP M
Subjt:  DFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLM

Query:  LLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
         LLL+PIGI+ +L+VLAFMPS+ +   T  +  +M
Subjt:  LLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE4.4e-0558.93Show/hide
Query:  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSS
        +L+C+ ASL+ILPLVLPPLPPPP M L+L+P+ +L +L+ LAFMP+      TSSS
Subjt:  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSS

Q8RXL7 ARGOS-like protein2.3e-1445.65Show/hide
Query:  RDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPP
        ++D +N+Q   +H+      + +NN +   D   + + +  +A A    K E  R+L SQ SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPP
Subjt:  RDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPP

Query:  PLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        P M LLL+PIGI+ +LMVLAFMPS+++K ++SSS T+M
Subjt:  PLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

Arabidopsis top hitse value%identityAlignment
AT2G44080.1 ARGOS-like1.6e-1545.65Show/hide
Query:  RDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPP
        ++D +N+Q   +H+      + +NN +   D   + + +  +A A    K E  R+L SQ SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPP
Subjt:  RDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSL-SQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPP

Query:  PLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
        P M LLL+PIGI+ +LMVLAFMPS+++K ++SSS T+M
Subjt:  PLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM

AT3G59900.1 auxin-regulated gene involved in organ size3.9e-0940.74Show/hide
Query:  DFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLM
        D +N+Q    ++   MD   +N  N S  S            +  + K E  RS S    R ++PA  +    L +L+ L ASLLILPLVLPPLPPPP M
Subjt:  DFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLM

Query:  LLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
         LLL+PIGI+ +L+VLAFMPS+ +   T  +  +M
Subjt:  LLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGA
GCAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGG
TCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCG
CCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATC
ACTTCCTCTTCTCATACATATATGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAGAAAAAAAGAAAAAGAAAAGAAAAGGGATAGGGGGTGAGAACCTTGGAAGCCACACTCTTCCTTCTCTTTCCAAAACCAGCAAGTTGCATCTTTCCTA
AACCCCACTTGCCCTATGAAATTCACTGAACCCATCCTTTTCTCTCTCTCTTTTAACATTTCGGTAAAATTTAAAAATCCAAAAAGTGCAGTCCACAACGACCCC
ATCAAATCAATATTCATCCCCTCTTCCTCTCTTTCTCATTCACCGCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCTCATCATTCCA
TAAATTCCCCTTTTCCCATTTCACTTTATTTCTTCCCAATTTCCTCTTCCTCTACGCAGATCTCGCTTTTTCCTTCTGCCTTCTTCCATTTCTCTAGATCCATTT
TCATTCTAGGGTTTACGATTCTTTGTTTCTTTCTTCTAATTGAGGGAATCTCGTATGCTATTGCTTCTGGATTGATTCATTCATTTAATGACTCTTGGATTTCAA
GAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAGCAACCTCTAATAATTCC
AATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCA
CCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCG
TTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACA
TATATGTAATGTAAATGCTAAATTGTCTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGATSNNSNYSSDSTNRISYYAAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLP
PLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM