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Clc06G11355 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G11355
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDimer_Tnp_hAT domain-containing protein
Genome locationClcChr06:21220991..21222732
RNA-Seq ExpressionClc06G11355
SyntenyClc06G11355
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP83714.1 hypothetical protein PHJA_000514900, partial [Phtheirospermum japonicum]1.9e-1379.59Show/hide
Query:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        ML M F+YGAMD AKEEIAK LGGEE SYKE+WNIIDEKWE Q+HR LH
Subjt:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

GFP83826.1 hypothetical protein PHJA_000526100 [Phtheirospermum japonicum]3.1e-1173.47Show/hide
Query:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        M  M F+YGAMD +KEEIAK LGGEE SYKE+WNIIDEKWE Q+H  LH
Subjt:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

GFP98364.1 hypothetical protein PHJA_001980300 [Phtheirospermum japonicum]3.7e-1261.9Show/hide
Query:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMTRATVDFFVDQDD
        M  M F+YGAMD AKEEI K LGGEE SYKE+WNIIDEKWE Q+H  LH T   ++     DD
Subjt:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMTRATVDFFVDQDD

GFQ02113.1 hypothetical protein PHJA_002355200 [Phtheirospermum japonicum]1.8e-1177.55Show/hide
Query:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        ML M F+YGAMD AKEEIAK LGGEE SYK +WNIIDEKWE Q+HR LH
Subjt:  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

XP_022159386.1 uncharacterized protein LOC111025802 [Momordica charantia]1.1e-1387.23Show/hide
Query:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        AM FIYGAMD+AKEEIAK  GGEEASYKEIWNIIDEKWE QLHR LH
Subjt:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

TrEMBL top hitse value%identityAlignment
A0A2I0V9A2 Uncharacterized protein4.8e-1072.34Show/hide
Query:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        AM FIY AMD AKE IA  LGGEEASY+EIW+I+D +WE QLHR LH
Subjt:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

A0A2I0X4E3 Uncharacterized protein3.7e-1074.47Show/hide
Query:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        AM FIY AMD AKE IA  LGGEEASY+EIW+IID +WE QLHR LH
Subjt:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

A0A2I0X531 Uncharacterized protein2.2e-1072.34Show/hide
Query:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        AM FIY AMD AKE IA  LGGEEASY+EIW+I+D +WE QLHR LH
Subjt:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

A0A2I0XBK8 Uncharacterized protein4.8e-1072.34Show/hide
Query:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        AM FIY AMD AKE IA  LGGEEASY+EIW+I+D +WE QLHR LH
Subjt:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

A0A6J1E3R9 uncharacterized protein LOC1110258025.5e-1487.23Show/hide
Query:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        AM FIYGAMD+AKEEIAK  GGEEASYKEIWNIIDEKWE QLHR LH
Subjt:  AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13030.1 hAT transposon superfamily protein6.0e-0538.64Show/hide
Query:  FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        ++Y  MD+ KE IA+    +   YK +W++ID+ W   LH  LH
Subjt:  FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

AT3G13030.2 hAT transposon superfamily protein6.0e-0538.64Show/hide
Query:  FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        ++Y  MD+ KE IA+    +   YK +W++ID+ W   LH  LH
Subjt:  FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

AT3G13030.3 hAT transposon superfamily protein6.0e-0538.64Show/hide
Query:  FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH
        ++Y  MD+ KE IA+    +   YK +W++ID+ W   LH  LH
Subjt:  FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH

AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related7.6e-0846.03Show/hide
Query:  MKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMT--RATVDFFVDQDDD
        M +IYGAMD AKE I K    +E +YK  + IID +W+ QLHR LH        +F   Q DD
Subjt:  MKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMT--RATVDFFVDQDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCAATGAAATTTATATATGGTGCCATGGATGCAGCAAAAGAAGAAATTGCCAAATACCTTGGGGGAGAGGAAGCAAGCTACAAGGAGATATGGAATATTATTGA
TGAAAAGTGGGAGTGTCAACTACATCGACAATTACATATGACAAGGGCTACTGTTGATTTCTTTGTTGACCAGGATGATGATTCTAAAATCAATATTTATGAGCTTGGAG
AAGGAAAACTTGTGACCACTCCGCAAGAGATTGTGTTTCTGAATCGCATTGTGGAGCCACCTCGTGCACCCTTAACACCCATGGCACCACCAGTACCACCTGTTGCACCT
ACTGATGGTATCAGGCCTTTAACAACTCACACTCCTGAGGATGTTGATGTGAACAATGATGCAAAGAAGAAGAAGAAGTTGATTAAGCTAATTAAAGGTATTGGTTGTTG
TGTTGATGTTCTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCAATGAAATTTATATATGGTGCCATGGATGCAGCAAAAGAAGAAATTGCCAAATACCTTGGGGGAGAGGAAGCAAGCTACAAGGAGATATGGAATATTATTGA
TGAAAAGTGGGAGTGTCAACTACATCGACAATTACATATGACAAGGGCTACTGTTGATTTCTTTGTTGACCAGGATGATGATTCTAAAATCAATATTTATGAGCTTGGAG
AAGGAAAACTTGTGACCACTCCGCAAGAGATTGTGTTTCTGAATCGCATTGTGGAGCCACCTCGTGCACCCTTAACACCCATGGCACCACCAGTACCACCTGTTGCACCT
ACTGATGGTATCAGGCCTTTAACAACTCACACTCCTGAGGATGTTGATGTGAACAATGATGCAAAGAAGAAGAAGAAGTTGATTAAGCTAATTAAAGGTATTGGTTGTTG
TGTTGATGTTCTTGACTAG
Protein sequenceShow/hide protein sequence
MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMTRATVDFFVDQDDDSKINIYELGEGKLVTTPQEIVFLNRIVEPPRAPLTPMAPPVPPVAP
TDGIRPLTTHTPEDVDVNNDAKKKKKLIKLIKGIGCCVDVLD