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Clc06G11740 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G11740
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionacyl-protein thioesterase 2
Genome locationClcChr06:22136954..22138412
RNA-Seq ExpressionClc06G11740
SyntenyClc06G11740
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR003140 - Phospholipase/carboxylesterase/thioesterase
IPR029058 - Alpha/Beta hydrolase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150012.1 acyl-protein thioesterase 2 [Cucumis sativus]2.0e-1479.63Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGS +S +  +L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
XP_008465012.1 PREDICTED: acyl-protein thioesterase 2 [Cucumis melo]2.0e-1479.63Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGS +S +  +L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
XP_022987844.1 acyl-protein thioesterase 2-like [Cucurbita maxima]3.9e-1372.22Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GG+AA++AIEFGKTYVVRPKGKHQAT+VWLHGLGDNGS +S +   L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
XP_023515795.1 acyl-protein thioesterase 2-like [Cucurbita pepo subsp. pepo]3.9e-1372.22Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GG+AA++AIEFGKTYVVRPKGKHQAT+VWLHGLGDNGS +S +   L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
XP_038879397.1 acyl-protein thioesterase 2 [Benincasa hispida]2.0e-1479.63Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGS +S +  +L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
TrEMBL top hitse value%identityAlignment
A0A0A0LU24 Abhydrolase_2 domain-containing protein9.9e-1579.63Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGS +S +  +L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
A0A1S3CMW5 acyl-protein thioesterase 29.9e-1579.63Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGS +S +  +L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
A0A498KEI7 Abhydrolase_2 domain-containing protein3.2e-1374.51Show/hide
Query:  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        GGR A++A+EFG+TYVVRPKGKHQATVVWLHGLGDNGS +S +  SL LP+
Subjt:  GGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
A0A6J1H9A6 acyl-protein thioesterase 2-like1.9e-1372.22Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GG+AA++AIEFGKTYVVRPKGKHQAT+VWLHGLGDNGS +S +   L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
A0A6J1JJZ2 acyl-protein thioesterase 2-like1.9e-1372.22Show/hide
Query:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        V  GG+AA++AIEFGKTYVVRPKGKHQAT+VWLHGLGDNGS +S +   L LP+
Subjt:  VLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52700.1 alpha/beta-Hydrolases superfamily protein6.4e-1468Show/hide
Query:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        G    +  EFG+TYVVRPKGKHQAT+VWLHGLGDNGS  S +  SLHLP+
Subjt:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
AT3G15650.1 alpha/beta-Hydrolases superfamily protein1.8e-1366Show/hide
Query:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        G  + +  EFG+TYVVRPKGKHQAT+VWLHGLGDNGS  S +  SL LP+
Subjt:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
AT5G20060.1 alpha/beta-Hydrolases superfamily protein7.5e-1568Show/hide
Query:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        GR  ++A+EFGKT+VVRPKGKHQAT+VWLHGLGDNGS +S +  +L LP+
Subjt:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
AT5G20060.2 alpha/beta-Hydrolases superfamily protein7.5e-1568Show/hide
Query:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        GR  ++A+EFGKT+VVRPKGKHQAT+VWLHGLGDNGS +S +  +L LP+
Subjt:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
AT5G20060.3 alpha/beta-Hydrolases superfamily protein7.5e-1568Show/hide
Query:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS
        GR  ++A+EFGKT+VVRPKGKHQAT+VWLHGLGDNGS +S +  +L LP+
Subjt:  GRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATTTTGTAGAGGTGTTGAAAGGTGGTAGAGCTGCCAAAAAGGCAATTGAGTTTGGTAAAACCTACGTAGTGAGGCCCAAGGGAAAACACCAAGCTACCGTTGT
CTGGCTTCATGGTCTTGGTGATAATGGCTCAAGGTTCTCTTGTATCTTTCTTTCTCTCCACTTACCTTCTCAGTTTGTCTACTCTTTCTCGAGCTCCTCTGCTCAGGATT
TTATGATTGATGTGATGAAGTTGACTATACACTGTGAAGGGGTGATCTATAAGGATGGGAGACAAATAAGGTCCACTGGGGCAGTAACCGACCAGTTAAAAGCGCTGAAA
AAGTTTGACCATATCCTTCTGGAAACAGTGCACTGGAGTAATAGATGGAGAAAGAACAAACTGCAGAAAATGTCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATTTTGTAGAGGTGTTGAAAGGTGGTAGAGCTGCCAAAAAGGCAATTGAGTTTGGTAAAACCTACGTAGTGAGGCCCAAGGGAAAACACCAAGCTACCGTTGT
CTGGCTTCATGGTCTTGGTGATAATGGCTCAAGGTTCTCTTGTATCTTTCTTTCTCTCCACTTACCTTCTCAGTTTGTCTACTCTTTCTCGAGCTCCTCTGCTCAGGATT
TTATGATTGATGTGATGAAGTTGACTATACACTGTGAAGGGGTGATCTATAAGGATGGGAGACAAATAAGGTCCACTGGGGCAGTAACCGACCAGTTAAAAGCGCTGAAA
AAGTTTGACCATATCCTTCTGGAAACAGTGCACTGGAGTAATAGATGGAGAAAGAACAAACTGCAGAAAATGTCTCTGTAA
Protein sequenceShow/hide protein sequence
MTDFVEVLKGGRAAKKAIEFGKTYVVRPKGKHQATVVWLHGLGDNGSRFSCIFLSLHLPSQFVYSFSSSSAQDFMIDVMKLTIHCEGVIYKDGRQIRSTGAVTDQLKALK
KFDHILLETVHWSNRWRKNKLQKMSL