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Clc06G12140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G12140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationClcChr06:22765268..22767479
RNA-Seq ExpressionClc06G12140
SyntenyClc06G12140
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653105.1 hypothetical protein Csa_020083, partial [Cucumis sativus]4.9e-3778.45Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH---KDDDNNIIVSNLEAD
        MALK+SLLLILPL+FCLF+S PTSGH+ + SSSSSSS     SSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH    +DD++++VSNLEAD
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH---KDDDNNIIVSNLEAD

Query:  LIPVPKDDAYYLLSWK
        L+PVPK +AYYLLSWK
Subjt:  LIPVPKDDAYYLLSWK

XP_008443990.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]1.2e-3575.65Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP
        MALK+SLLLILPL+F LF+S PTSGHE + SS          SSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH +++NN++VSNLEADL+P
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP

Query:  VPKDDAYYLLSWKSY
        VP+DDAYYLLSWK +
Subjt:  VPKDDAYYLLSWKSY

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]2.7e-2766.09Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNI--IVSNLEADL
        MAL NSL LILPLIF L +  PTSG+ED                   SKQKEL IGSRPP+CFNKCLNCKPCVAALVISQRHK DD+N   +VSNLEA  
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNI--IVSNLEADL

Query:  IPVPKDDAYYLLSWK
          VPKDDAYYLLSWK
Subjt:  IPVPKDDAYYLLSWK

XP_031736064.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucumis sativus]4.9e-3778.45Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH---KDDDNNIIVSNLEAD
        MALK+SLLLILPL+FCLF+S PTSGH+ + SSSSSSS     SSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH    +DD++++VSNLEAD
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH---KDDDNNIIVSNLEAD

Query:  LIPVPKDDAYYLLSWK
        L+PVPK +AYYLLSWK
Subjt:  LIPVPKDDAYYLLSWK

XP_038879118.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Benincasa hispida]1.7e-4291.23Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSS-SSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLI
        MALKNSLLLILPLIFCLF S PTSGHEDSS SSSSSSSSSSS SSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQ HK+DD  I+VSNLEADL+
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSS-SSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLI

Query:  PVPKDDAYYLLSWK
        PVPKDDAYYLLSWK
Subjt:  PVPKDDAYYLLSWK

TrEMBL top hitse value%identityAlignment
A0A1S3B8V6 Epidermal patterning factor-like protein5.8e-3675.65Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP
        MALK+SLLLILPL+F LF+S PTSGHE + SS          SSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRH +++NN++VSNLEADL+P
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP

Query:  VPKDDAYYLLSWKSY
        VP+DDAYYLLSWK +
Subjt:  VPKDDAYYLLSWKSY

A0A6J1EZ19 Epidermal patterning factor-like protein1.3e-2766.09Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNI--IVSNLEADL
        MAL NSL LILPLIF L +  PTSG+ED                   SKQKEL IGSRPP+CFNKCLNCKPCVAALVISQRHK DD+N   +VSNLEA  
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNI--IVSNLEADL

Query:  IPVPKDDAYYLLSWK
          VPKDDAYYLLSWK
Subjt:  IPVPKDDAYYLLSWK

A0A6J1HB97 Epidermal patterning factor-like protein2.2e-2767.26Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP
        MALK+SLLLILPLIF L +S PTSG+ED                  SSKQKELVIGSRPP+CFNKCLNC+PCVAALVISQRHK   NN   S+LEA L P
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP

Query:  VPKDDAYYLLSWK
         P+DDAYYLLSWK
Subjt:  VPKDDAYYLLSWK

A0A6J1I4N2 Epidermal patterning factor-like protein1.9e-2665.22Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNI--IVSNLEADL
        MAL NSL LILPLIF L + LPTSG+ED                   SKQKEL IGSRPP+CFNKCLNCKPCVAALVISQR K  DNN   +VSN+EA  
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNI--IVSNLEADL

Query:  IPVPKDDAYYLLSWK
          VPKDDAYYLLSWK
Subjt:  IPVPKDDAYYLLSWK

A0A6J1JFP8 Epidermal patterning factor-like protein1.3e-2767.26Show/hide
Query:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP
        MALK+SLLLILPLIF L +S PTSG+ED                  SS+QKELVIGSRPP+CFNKCLNC+PCVAALVISQRHK   NN   SNLEA L P
Subjt:  MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIP

Query:  VPKDDAYYLLSWK
         P+DDAYYLLSWK
Subjt:  VPKDDAYYLLSWK

SwissProt top hitse value%identityAlignment
Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 83.3e-0451.22Show/hide
Query:  KQKELVIGSRPPQCFNKCLNCKPCVAALV-ISQRHKDDDNN
        + KE V+GS PP C  KC NCKPC+  L  I   H DDD++
Subjt:  KQKELVIGSRPPQCFNKCLNCKPCVAALV-ISQRHKDDDNN

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein2.4e-0551.22Show/hide
Query:  KQKELVIGSRPPQCFNKCLNCKPCVAALV-ISQRHKDDDNN
        + KE V+GS PP C  KC NCKPC+  L  I   H DDD++
Subjt:  KQKELVIGSRPPQCFNKCLNCKPCVAALV-ISQRHKDDDNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAAAAAACTCTCTCCTTCTCATTCTTCCTCTCATATTTTGCCTTTTTATCTCTCTCCCCACATCAGGGCATGAGGATTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCAAAGCAGAAGGAATTGGTAATTGGATCAAGGCCACCACAGTGCTTCAACAAGTGCTTAAATTGCAAGCCATGTGTTG
CTGCTTTGGTTATTTCTCAGCGCCATAAAGATGATGACAATAATATTATTGTTTCTAATTTGGAGGCAGATCTTATTCCAGTTCCTAAAGATGATGCTTATTATCTTCTC
TCATGGAAATCATATACTGAAGTTCAGATCATAGACAAAGTGAAGCTTCATGATCGTCTGCTGCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAAAAAACTCTCTCCTTCTCATTCTTCCTCTCATATTTTGCCTTTTTATCTCTCTCCCCACATCAGGGCATGAGGATTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCAAAGCAGAAGGAATTGGTAATTGGATCAAGGCCACCACAGTGCTTCAACAAGTGCTTAAATTGCAAGCCATGTGTTG
CTGCTTTGGTTATTTCTCAGCGCCATAAAGATGATGACAATAATATTATTGTTTCTAATTTGGAGGCAGATCTTATTCCAGTTCCTAAAGATGATGCTTATTATCTTCTC
TCATGGAAATCATATACTGAAGTTCAGATCATAGACAAAGTGAAGCTTCATGATCGTCTGCTGCATCATTGA
Protein sequenceShow/hide protein sequence
MALKNSLLLILPLIFCLFISLPTSGHEDSSSSSSSSSSSSSFSSSSSSKQKELVIGSRPPQCFNKCLNCKPCVAALVISQRHKDDDNNIIVSNLEADLIPVPKDDAYYLL
SWKSYTEVQIIDKVKLHDRLLHH