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Clc06G12690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G12690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:23611165..23613302
RNA-Seq ExpressionClc06G12690
SyntenyClc06G12690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]3.7e-2772.73Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        TKLPL+LL+CI ILAS VTA P  VAA  P   ++KD     CISFVPMATK VIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

KAA0050065.1 hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]2.2e-2772.28Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   ++   C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  L
        L
Subjt:  L

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]3.7e-2773.96Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        TKLPLVL +CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKNVVAPHPSCCEAI++L++CSS+FLKDIPSGDMILVKS+CA
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

TYK10343.1 hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa]2.9e-2772.28Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   +    C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  L
        L
Subjt:  L

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]2.2e-2773.96Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        TKLPLVLL+CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein1.8e-2772.73Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        TKLPL+LL+CI ILAS VTA P  VAA  P   ++KD     CISFVPMATK VIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

A0A5A7U8Y3 Uncharacterized protein1.1e-2772.28Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   ++   C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  L
        L
Subjt:  L

A0A5A7U9B0 Uncharacterized protein1.8e-2773.96Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        TKLPLVL +CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKNVVAPHPSCCEAI++L++CSS+FLKDIPSGDMILVKS+CA
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

A0A5D3CEQ4 Uncharacterized protein1.4e-2772.28Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   +    C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  L
        L
Subjt:  L

A0A5D3CFS6 Uncharacterized protein1.1e-2773.96Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        TKLPLVLL+CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCATCCAGGAACTGTGGCAGCACCGGCGCCTAATCC
GTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGCTCCTCATCCTTCTTGTTGCGAAGCTATTTCTA
AACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTCTTCTACATAGTCATTTTAGCATCACCCCCACG
TCGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGGCTGCACATCTTTTATTTTCGAGGCGACAAGATGTGTGATTGATGTGATAAAGAACGCTATTGCTCCTCA
TCCATCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTTACTCGGAGTTTCTCAAAGACATTCCATCTGCTGACATGATTTTAATTAAGGGCATTTGTGCTTTGTGGG
GTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCATCCAGGAACTGTGGCAGCACCGGCGCCTAATCC
GTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGCTCCTCATCCTTCTTGTTGCGAAGCTATTTCTA
AACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTCTTCTACATAGTCATTTTAGCATCACCCCCACG
TCGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGGCTGCACATCTTTTATTTTCGAGGCGACAAGATGTGTGATTGATGTGATAAAGAACGCTATTGCTCCTCA
TCCATCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTTACTCGGAGTTTCTCAAAGACATTCCATCTGCTGACATGATTTTAATTAAGGGCATTTGTGCTTTGTGGG
GTGTTTGA
Protein sequenceShow/hide protein sequence
MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALLHSHFSITPT
SPDSTTLEDFSLLGCTSFIFEATRCVIDVIKNAIAPHPSCCKAISKLNDCYSEFLKDIPSADMILIKGICALWGV