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Clc06G12700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G12700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:23628384..23628998
RNA-Seq ExpressionClc06G12700
SyntenyClc06G12700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]9.3e-3677.88Show/hide
Query:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA
        MAS+K+ LVF VC+AI A+  +A T AA P DPFT E  SLLGCTSFISEATKC+IDVMKN VAPHPSCCKA SKLNDCS EFLK +PSADMILIKGICA
Subjt:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

KAA0050080.1 hypothetical protein E6C27_scaffold675G00640 [Cucumis melo var. makuwa]6.1e-2765.69Show/hide
Query:  ASMKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALW
        ASMKV L+FLVCIAI  LP MART   + D F  +DF+ + CT F  EATKCMIDVMKN + PHPSCC+AI KLNDC+ E  K+VPSAD  L+K ICALW
Subjt:  ASMKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALW

Query:  GV
        GV
Subjt:  GV

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]2.6e-3881.73Show/hide
Query:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA
        MASMK+ LVFLVCIAI A+  MA T A  P DPFT E+FSLLGCTSFISEAT CM+DVMKN VAPHPSCCKA SKLNDCSSEFLK +PSADMILIKGICA
Subjt:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

KAG6589812.1 hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia]8.5e-2970Show/hide
Query:  MKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALWGV
        MK+A   LVCIAI A PAMA      PDPF  E FSL GCTS +SE TKC++DVMK  VAPHPSCC+AISKLN CSS FLK+VPSADM LIK +CALWGV
Subjt:  MKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALWGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]4.2e-3677.88Show/hide
Query:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA
        MAS+K+ LVF VC+AI A+  +A T AA P DPFT E+ SLLGCTSFISEATKC+IDVMKN VAPHPSCCKA SKLNDCS EFLK +PSADMILIKGICA
Subjt:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

TrEMBL top hitse value%identityAlignment
A0A5A7U471 Uncharacterized protein2.9e-2765.69Show/hide
Query:  ASMKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALW
        ASMKV L+FLVCIAI  LP MART   + D F  +DF+ + CT F  EATKCMIDVMKN + PHPSCC+AI KLNDC+ E  K+VPSAD  L+K ICALW
Subjt:  ASMKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALW

Query:  GV
        GV
Subjt:  GV

A0A5A7U483 Uncharacterized protein4.5e-3677.88Show/hide
Query:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA
        MAS+K+ LVF VC+AI A+  +A T AA P DPFT E  SLLGCTSFISEATKC+IDVMKN VAPHPSCCKA SKLNDCS EFLK +PSADMILIKGICA
Subjt:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

A0A5A7U904 Uncharacterized protein2.5e-2660.58Show/hide
Query:  ASMKVALVFLVCIAISALPAMARTAAAV---PDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGIC
        ++MK+ L+FL C AI  LPA A  AA     PDPF TED S   C SF+ EATKCMIDV K+ +APHP+CCKAISKL  CSS F   +PSADMILIK +C
Subjt:  ASMKVALVFLVCIAISALPAMARTAAAV---PDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGIC

Query:  ALWG
          WG
Subjt:  ALWG

A0A5D3CFS6 Uncharacterized protein5.5e-2663.81Show/hide
Query:  ASMKVALVFLVCIAISALPAMAR---TAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGIC
        A  K+ LV LVCIAI A    AR    AAA P   T+EDFSL  C SF+ +ATKC+IDV+KN VAPHPSCC+AIS+L+DCSS+FLK++PS+DMIL+K IC
Subjt:  ASMKVALVFLVCIAISALPAMAR---TAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGIC

Query:  ALWGV
        A WGV
Subjt:  ALWGV

A0A5D3CG41 Uncharacterized protein2.0e-3677.88Show/hide
Query:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA
        MAS+K+ LVF VC+AI A+  +A T AA P DPFT E+ SLLGCTSFISEATKC+IDVMKN VAPHPSCCKA SKLNDCS EFLK +PSADMILIKGICA
Subjt:  MASMKVALVFLVCIAISALPAMARTAAAVP-DPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATGAAGGTAGCACTTGTGTTCCTAGTATGCATAGCCATTTCAGCATTACCCGCAATGGCACGCACTGCAGCGGCAGTGCCTGATCCATTCACAACAGAGGA
TTTCTCATTATTGGGTTGCACATCGTTTATTTCCGAGGCTACGAAATGTATGATTGATGTGATGAAGAATGTGGTTGCTCCTCATCCGTCATGTTGCAAAGCTATTTCTA
AGCTCAATGATTGTTCCTCCGAGTTTCTCAAAAACGTTCCCTCTGCTGACATGATTTTGATTAAAGGCATTTGTGCTTTGTGGGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
TCAAACCCTCCTTACTCCACCATTTTCTCCCACCAACCAACCACAGCATAATTCAATAATCTTCTCTTAACCATTTTCACACCCAAATTGAAACCATGGCCTCAATGAAG
GTAGCACTTGTGTTCCTAGTATGCATAGCCATTTCAGCATTACCCGCAATGGCACGCACTGCAGCGGCAGTGCCTGATCCATTCACAACAGAGGATTTCTCATTATTGGG
TTGCACATCGTTTATTTCCGAGGCTACGAAATGTATGATTGATGTGATGAAGAATGTGGTTGCTCCTCATCCGTCATGTTGCAAAGCTATTTCTAAGCTCAATGATTGTT
CCTCCGAGTTTCTCAAAAACGTTCCCTCTGCTGACATGATTTTGATTAAAGGCATTTGTGCTTTGTGGGGTGTTTGATTCAATTTCTTTAGTCTGAAGGTTTTTTGAGTT
AATTGGATCAAAATGAATAAGAACATTCTCATTTTTTTTTCCTATATTAGTACTATTTTATAAATTTGAGGAAGAGTGGATTTTGTTAGAGAGCAAAAGTGTTGCTTGAT
CCATTTGAATGAGAACTACCATTTTCCTACTGTTTGTCATAGGCCATTTAATGTGTACTTTTAAC
Protein sequenceShow/hide protein sequence
MASMKVALVFLVCIAISALPAMARTAAAVPDPFTTEDFSLLGCTSFISEATKCMIDVMKNVVAPHPSCCKAISKLNDCSSEFLKNVPSADMILIKGICALWGV