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Clc06G12730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G12730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:23644273..23645231
RNA-Seq ExpressionClc06G12730
SyntenyClc06G12730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]2.2e-3073.33Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL
        TKLPL+LL+CI ILAS VTA P  VAA  P   ++KD     CISFVPMATK VIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA 
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL

Query:  WGVSI
        WGVSI
Subjt:  WGVSI

KAA0050065.1 hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]5.9e-3173.58Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   ++   C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  LWGVSI
        LWGVSI
Subjt:  LWGVSI

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]2.2e-3074.51Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV
        TKLPLVL +CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKNVVAPHPSCCEAI++L++CSS+FLKDIPSGDMILVKS+CA WGV
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV

Query:  SI
        SI
Subjt:  SI

TYK10343.1 hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa]7.7e-3173.58Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   +    C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  LWGVSI
        LWGVSI
Subjt:  LWGVSI

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.3e-3074.51Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV
        TKLPLVLL+CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA WGV
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV

Query:  SI
        SI
Subjt:  SI

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein1.1e-3073.33Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL
        TKLPL+LL+CI ILAS VTA P  VAA  P   ++KD     CISFVPMATK VIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA 
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL

Query:  WGVSI
        WGVSI
Subjt:  WGVSI

A0A5A7U8Y3 Uncharacterized protein2.9e-3173.58Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   ++   C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  LWGVSI
        LWGVSI
Subjt:  LWGVSI

A0A5A7U9B0 Uncharacterized protein1.1e-3074.51Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV
        TKLPLVL +CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKNVVAPHPSCCEAI++L++CSS+FLKDIPSGDMILVKS+CA WGV
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV

Query:  SI
        SI
Subjt:  SI

A0A5D3CEQ4 Uncharacterized protein3.7e-3173.58Show/hide
Query:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA
        MAAS TKLPL LL CI ILAS V A P TVAA AP   +    C SFVP AT+CVIDVLKN VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CA
Subjt:  MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA

Query:  LWGVSI
        LWGVSI
Subjt:  LWGVSI

A0A5D3CFS6 Uncharacterized protein6.4e-3174.51Show/hide
Query:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV
        TKLPLVLL+CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKN VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA WGV
Subjt:  TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGV

Query:  SI
        SI
Subjt:  SI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAGCTTTGGGCGACATCTCCTTTGTCTACGTTCGTTGATGGAATAATGTCTTGGCTCACTCTTTGGCGTCCAAGTCGTTGGAGGATCAAATTTTTGTCCATCTT
TTTCTCTTTACTCGCACCAACAATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCATCCAGGAACTG
TGGCAGCACCGGCGCCTAATCCGTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGCTCCTCATCCT
TCTTGTTGCGAAGCTATTTCTAAACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTCTGTGGGGAGT
TTCTATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
GTTAAGTCATATGTGCAAGCTTTGGGCGACATCTCCTTTGTCTACGTTCGTTGATGGAATAATGTCTTGGCTCACTCTTTGGCGTCCAAGTCGTTGGAGGATCAAATTTT
TGTCCATCTTTTTCTCTTTACTCGCACCAACAATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCAT
CCAGGAACTGTGGCAGCACCGGCGCCTAATCCGTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGC
TCCTCATCCTTCTTGTTGCGAAGCTATTTCTAAACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTC
TGTGGGGAGTTTCTATTTTTTAAACTAAACGTTGTTTGACTTAATTTGATGAAGATGAATAAGAAAGTTATCCATG
Protein sequenceShow/hide protein sequence
MCKLWATSPLSTFVDGIMSWLTLWRPSRWRIKFLSIFFSLLAPTMAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHP
SCCEAISKLYECSSEFLKDIPSGDMILVKSVCALWGVSIF