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Clc06G13460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G13460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:24341046..24342895
RNA-Seq ExpressionClc06G13460
SyntenyClc06G13460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0LTC2 Uncharacterized protein8.2e-0452.81Show/hide
Query:  SSDSHLPPPPNKQR-PDPNRIKELLKQFA-TQFSQKRFRSHRASIRKRRRRRRQRA--SRHYSSQSYIPTVSLPNICFAILSSILHNLL
        SSD HL PP + QR    N+ K    + A T+ S KR RS R SIRKRRRR  QRA   R+YSS     TVSL  I F I  SILHNL+
Subjt:  SSDSHLPPPPNKQR-PDPNRIKELLKQFA-TQFSQKRFRSHRASIRKRRRRRRQRA--SRHYSSQSYIPTVSLPNICFAILSSILHNLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAGGAGGACCCCTCTCTTCTTCCTCAGATTCTCATCTTCCTCCGCCTCCCAACAAACAAAGACCCGACCCAAACAGAATCAAAGAGCTTCTCAAACAATTCGC
CACTCAATTCTCTCAAAAACGCTTCAGATCTCATCGCGCTTCCATTAGGAAACGTCGAAGACGCCGGCGCCAACGCGCTTCCAGGCATTACTCCTCCCAAAGTTATATTC
CAACGGTTTCTTTGCCGAACATTTGCTTCGCGATTCTTTCGTCGATTCTGCATAATCTGCTTACTGTTAAACTCACATTGAAGATGAAGATGAAGATGAAAGCTGGGGAT
GCCGAGGATCGATCCAAAGGTGCTCACTCATTGAGCCCCGGTAAGGCAGGCTCAACCCTCCATTTATCGTACAAGATTGAATTTCAACATCAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGAGGAGGACCCCTCTCTTCTTCCTCAGATTCTCATCTTCCTCCGCCTCCCAACAAACAAAGACCCGACCCAAACAGAATCAAAGAGCTTCTCAAACAATTCGC
CACTCAATTCTCTCAAAAACGCTTCAGATCTCATCGCGCTTCCATTAGGAAACGTCGAAGACGCCGGCGCCAACGCGCTTCCAGGCATTACTCCTCCCAAAGTTATATTC
CAACGGTTTCTTTGCCGAACATTTGCTTCGCGATTCTTTCGTCGATTCTGCATAATCTGCTTACTGTTAAACTCACATTGAAGATGAAGATGAAGATGAAAGCTGGGGAT
GCCGAGGATCGATCCAAAGGTGCTCACTCATTGAGCCCCGGTAAGGCAGGCTCAACCCTCCATTTATCGTACAAGATTGAATTTCAACATCAAGATTAA
Protein sequenceShow/hide protein sequence
MDRGGPLSSSSDSHLPPPPNKQRPDPNRIKELLKQFATQFSQKRFRSHRASIRKRRRRRRQRASRHYSSQSYIPTVSLPNICFAILSSILHNLLTVKLTLKMKMKMKAGD
AEDRSKGAHSLSPGKAGSTLHLSYKIEFQHQD