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Clc06G14630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G14630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionFiber protein Fb15
Genome locationClcChr06:25617258..25624317
RNA-Seq ExpressionClc06G14630
SyntenyClc06G14630
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589691.1 hypothetical protein SDJN03_15114, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2989.04Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVLYILRVKVPQR
        MAM+QF+SE+KGLKVKELPAYVKPMLS+DY KKAVQR LDNYNAKYIQTGSIDPL HVCFGVLY+LRVKVPQR
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVLYILRVKVPQR
KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]1.4e-2375Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
        MAMKQFFSE+KGLKVKELPAYVKPMLSID AKKAV+RSLDNYNAKYIQT SIDPL HVCFG +   Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
XP_004146334.1 uncharacterized protein LOC101202935 [Cucumis sativus]1.4e-2375Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
        MAMKQFFSE+KGLKVKELPAYVKPMLSID AKKAV+RSLDNYNAKYIQT SIDPL HVCFG +   Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
XP_022974229.1 uncharacterized protein LOC111472849 [Cucurbita maxima]1.1e-2372.5Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFG---VLYILRVKVPQRNPEH
        MAM+QFFSE++GLKVKELP YVKPMLSIDYAKKAVQR LDNYNAKYIQTGSIDPL HVC+G   + Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFG---VLYILRVKVPQRNPEH
XP_038879762.1 uncharacterized protein LOC120071511 [Benincasa hispida]9.7e-2576.25Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
        MAMKQFFSE++GLKVKELPAYVKPMLSID AKKAVQR LDNYNAKYIQTGSIDPLYHVCFG +   Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
TrEMBL top hitse value%identityAlignment
A0A0A0LXD4 Uncharacterized protein6.8e-2475Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
        MAMKQFFSE+KGLKVKELPAYVKPMLSID AKKAV+RSLDNYNAKYIQT SIDPL HVCFG +   Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
A0A1S3BWJ6 uncharacterized protein LOC1034942391.2e-2373.75Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
        MAMKQFFSE+KGLKVKELPAYVKPMLSID AKK VQRSLDNY+AKYIQT SIDPL+HVCFG +   Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
A0A5D3DYB3 Uncharacterized protein1.2e-2373.75Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
        MAMKQFFSE+KGLKVKELPAYVKPMLSID AKK VQRSLDNY+AKYIQT SIDPL+HVCFG +   Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVL---YILRVKVPQRNPEH
A0A6J1E7G2 uncharacterized protein LOC1114301036.8e-2472.5Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFG---VLYILRVKVPQRNPEH
        MAM+QF+SE+KGLKVKELPAYVKPMLS+DY KKAVQR LDNYNAKYIQTGSIDPL HVCFG   + Y+L +   +R+  H
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFG---VLYILRVKVPQRNPEH
A0A6J1IH01 uncharacterized protein LOC1114728495.2e-2472.5Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFG---VLYILRVKVPQRNPEH
        MAM+QFFSE++GLKVKELP YVKPMLSIDYAKKAVQR LDNYNAKYIQTGSIDPL HVC+G   + Y++ +   +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFG---VLYILRVKVPQRNPEH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30010.1 unknown protein4.0e-1647.5Show/hide
Query:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF-GVLYILRVKVP--QRNPEH
        MA+++ +SE++G KV ELP Y+K   S++  K +V+R LDNYN KYIQT S+DP+ H+CF G+ +   V +P  +R+ EH
Subjt:  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF-GVLYILRVKVP--QRNPEH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGAAGCAATTCTTCTCCGAAGTCAAGGGCTTGAAGGTTAAGGAGCTGCCCGCCTATGTGAAGCCGATGCTCTCCATTGATTATGCCAAGAAGGCAGTGCAGAG
AAGTCTCGACAATTACAACGCCAAGTACATTCAAACTGGTTCTATTGACCCTCTCTATCATGTCTGCTTTGGTGTTCTTTATATTTTGAGGGTGAAGGTGCCTCAAAGAA
ATCCAGAGCATTGCCATCGCTTGTGGAGTCGATTCCGGACAGACTTTCCAAGTTCGGAGATCGAAGAAGCTGAGGCTGAGACACAGAGCGGTGACCATTGTATGAGAAGC
ATCTTCGTGCTGGTTGTTAGATCATTCAATTTGAAGATCCCTTTCGTTTTCTCCATTCTCCTCGAGTTCCATGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGAAGCAATTCTTCTCCGAAGTCAAGGGCTTGAAGGTTAAGGAGCTGCCCGCCTATGTGAAGCCGATGCTCTCCATTGATTATGCCAAGAAGGCAGTGCAGAG
AAGTCTCGACAATTACAACGCCAAGTACATTCAAACTGGTTCTATTGACCCTCTCTATCATGTCTGCTTTGGTGTTCTTTATATTTTGAGGGTGAAGGTGCCTCAAAGAA
ATCCAGAGCATTGCCATCGCTTGTGGAGTCGATTCCGGACAGACTTTCCAAGTTCGGAGATCGAAGAAGCTGAGGCTGAGACACAGAGCGGTGACCATTGTATGAGAAGC
ATCTTCGTGCTGGTTGTTAGATCATTCAATTTGAAGATCCCTTTCGTTTTCTCCATTCTCCTCGAGTTCCATGTGTAG
Protein sequenceShow/hide protein sequence
MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVLYILRVKVPQRNPEHCHRLWSRFRTDFPSSEIEEAEAETQSGDHCMRS
IFVLVVRSFNLKIPFVFSILLEFHV