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Clc06G14740 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G14740
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:25733018..25733575
RNA-Seq ExpressionClc06G14740
SyntenyClc06G14740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058205.1 hypothetical protein E6C27_scaffold274G005260 [Cucumis melo var. makuwa]1.5e-0957.83Show/hide
Query:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
        MD N +H+  NQ  QQQ+  +S   +++ G ENE MDPT K+LIRQ IV GDD+   GG ET  AS+VLAF+RSV+KTDSSLE
Subjt:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
KGN65494.1 hypothetical protein Csa_019946 [Cucumis sativus]1.8e-1057.14Show/hide
Query:  MDPNHNHQPNQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGG----DDSGG-LETHGASDVLAFSRSVNKTDSSLE
        MD N NH       QQ+++Q    +N+ GRENE MDPT K+LIRQ IV G    DD+GG  E  G S+VLAF+RSVNKTDSSLE
Subjt:  MDPNHNHQPNQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGG----DDSGG-LETHGASDVLAFSRSVNKTDSSLE
TYK28569.1 hypothetical protein E5676_scaffold629G002160 [Cucumis melo var. makuwa]1.5e-0957.83Show/hide
Query:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
        MD N +H+  NQ  QQQ+  +S   +++ G ENE MDPT K+LIRQ IV GDD+   GG ET  AS+VLAF+RSV+KTDSSLE
Subjt:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
TrEMBL top hitse value%identityAlignment
A0A0A0LWZ4 Uncharacterized protein8.6e-1157.14Show/hide
Query:  MDPNHNHQPNQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGG----DDSGG-LETHGASDVLAFSRSVNKTDSSLE
        MD N NH       QQ+++Q    +N+ GRENE MDPT K+LIRQ IV G    DD+GG  E  G S+VLAF+RSVNKTDSSLE
Subjt:  MDPNHNHQPNQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGG----DDSGG-LETHGASDVLAFSRSVNKTDSSLE
A0A5A7UX55 Uncharacterized protein7.3e-1057.83Show/hide
Query:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
        MD N +H+  NQ  QQQ+  +S   +++ G ENE MDPT K+LIRQ IV GDD+   GG ET  AS+VLAF+RSV+KTDSSLE
Subjt:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
A0A5D3DYW2 Uncharacterized protein7.3e-1057.83Show/hide
Query:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
        MD N +H+  NQ  QQQ+  +S   +++ G ENE MDPT K+LIRQ IV GDD+   GG ET  AS+VLAF+RSV+KTDSSLE
Subjt:  MDPNHNHQP-NQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDS---GGLETHGASDVLAFSRSVNKTDSSLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGAATCATAATCATCAACCCAACCAACTCCGACAACAACAAGAACATGAACAATCCGAACCCAAATCCAACAACGGTGGCCGAGAAAATGAAACCATG
GATCCGACCATGAAGGTGTTGATTCGACAAGGAATCGTAGGCGGCGACGATAGCGGCGGATTGGAGACTCACGGCGCCTCTGACGTTCTGGCCTTTTCCAGATCA
GTCAACAAAACTGACTCTTCTCTCGAATGA
mRNA sequenceShow/hide mRNA sequence
GAAGACTGTAAAATGAAAATGAATAAACTTAATTAACACGTGTCAGTCAGCGGGTTCTCGTGGAGGACACGTGTCTCCAAATTTGCCCTTAAATTGGCAGAGTGT
GTAAAGAGAGGCGGTGAGATTTGATTAAACGATGGATCCGAATCATAATCATCAACCCAACCAACTCCGACAACAACAAGAACATGAACAATCCGAACCCAAATC
CAACAACGGTGGCCGAGAAAATGAAACCATGGATCCGACCATGAAGGTGTTGATTCGACAAGGAATCGTAGGCGGCGACGATAGCGGCGGATTGGAGACTCACGG
CGCCTCTGACGTTCTGGCCTTTTCCAGATCAGTCAACAAAACTGACTCTTCTCTCGAATGATGGTCCATTCTCAATCTGTTTGAATATATTATGTGTCTTTGTTG
TGTTTCTATTTAGTAACTATTTGCTTTTAATTTTGTAGATGATTTGTTAATGCTCCAAATTGTTCGCTTTCTACTTCCTAATTACTGCCTACTTGTAACATTATA
TTAACAATATTTTACAATCTGGTTCACAACCAA
Protein sequenceShow/hide protein sequence
MDPNHNHQPNQLRQQQEHEQSEPKSNNGGRENETMDPTMKVLIRQGIVGGDDSGGLETHGASDVLAFSRSVNKTDSSLE