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Clc06G14800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G14800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCyclin-dependent protein kinase inhibitor SMR6-like protein
Genome locationClcChr06:25768218..25768529
RNA-Seq ExpressionClc06G14800
SyntenyClc06G14800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV59718.1 hypothetical protein CFOL_v3_03249 [Cephalotus follicularis]1.1e-1248.65Show/hide
Query:  MGMEILEEFQP-----------LTPLSSLQFIIPKDKTQE----EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQ
        MG+E+ EEF+P           LT  S +  I    KTQE    + EEEC TP +A + L   +VCPPAP K RPP+RKL   P  FFE P DL SL+F 
Subjt:  MGMEILEEFQP-----------LTPLSSLQFIIPKDKTQE----EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQ

Query:  LHIPSKKIKPI
        L+ PSKKI+PI
Subjt:  LHIPSKKIKPI

KAF5456423.1 hypothetical protein F2P56_025911 [Juglans regia]3.6e-1142.34Show/hide
Query:  MGMEILEEFQPLTPLSSLQ------------FIIPKDKTQE----EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYF
        MG+EI+EEF+P+TP+ ++              ++  D+T+E    E+ +EC TP ++   LK  +VCPPAPKKPR  RRK++  P  FFE P DL S++ 
Subjt:  MGMEILEEFQPLTPLSSLQ------------FIIPKDKTQE----EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYF

Query:  QL-HIPSKKIK
         L + PSKKI+
Subjt:  QL-HIPSKKIK

KAG6587720.1 hypothetical protein SDJN03_16285, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2868.93Show/hide
Query:  MGMEILEEFQPLTPL---SSLQFIIPKDKT--QEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKP
        MGME+++EF+PLTPL    SLQ  IPK++   QE++ EEC TPTAA +RLKP + CPPAPKKPRPPRRKLNF PP FF+APQDL S+YF+L  PSKKIKP
Subjt:  MGMEILEEFQPLTPL---SSLQFIIPKDKT--QEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKP

Query:  IST
        IST
Subjt:  IST

KAG6589677.1 hypothetical protein SDJN03_15100, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3374Show/hide
Query:  MGMEILEEFQPLTPLSSLQFIIPKDKTQE--EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPIST
        MGME+LEEF+PLTPL SL   +PK+K  +  +E+E+C TPTAAA RLKP +VCPPAPKKPRPPRRKLNFLPPPFFEAPQDL+S+Y +L IPSKKIKPI+T
Subjt:  MGMEILEEFQPLTPLSSLQFIIPKDKTQE--EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPIST

KGN65496.1 hypothetical protein Csa_019987 [Cucumis sativus]2.8e-4087Show/hide
Query:  MGMEILEEFQPLTPLSSLQFIIPKDKT----QEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPI
        MGMEIL+EF PLTPLSSLQFIIPK KT    QE++EEECLTPTAAAARLKPA++CPPAPKKPRPPRRKLNFLPPPFFEAPQDLNS+YFQ HIPSKKIKPI
Subjt:  MGMEILEEFQPLTPLSSLQFIIPKDKT----QEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPI

TrEMBL top hitse value%identityAlignment
A0A0A0M005 Uncharacterized protein1.4e-4087Show/hide
Query:  MGMEILEEFQPLTPLSSLQFIIPKDKT----QEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPI
        MGMEIL+EF PLTPLSSLQFIIPK KT    QE++EEECLTPTAAAARLKPA++CPPAPKKPRPPRRKLNFLPPPFFEAPQDLNS+YFQ HIPSKKIKPI
Subjt:  MGMEILEEFQPLTPLSSLQFIIPKDKT----QEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPI

A0A1Q3AVG9 Uncharacterized protein5.4e-1348.65Show/hide
Query:  MGMEILEEFQP-----------LTPLSSLQFIIPKDKTQE----EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQ
        MG+E+ EEF+P           LT  S +  I    KTQE    + EEEC TP +A + L   +VCPPAP K RPP+RKL   P  FFE P DL SL+F 
Subjt:  MGMEILEEFQP-----------LTPLSSLQFIIPKDKTQE----EEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQ

Query:  LHIPSKKIKPI
        L+ PSKKI+PI
Subjt:  LHIPSKKIKPI

A0A2N9GCU9 Uncharacterized protein1.9e-1043.27Show/hide
Query:  MGMEILEEFQPLTPLSSLQ---------FIIPKDKTQEEEEEECLTPTAAAARLKPA-VVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPS
        MG+EILEEF+P+TP+ ++           +   D+T+E +  EC TP + A   K   +VCPPAPKKPRP R KL+     +F+ P DL S++  L+ PS
Subjt:  MGMEILEEFQPLTPLSSLQ---------FIIPKDKTQEEEEEECLTPTAAAARLKPA-VVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPS

Query:  KKIK
        KKI+
Subjt:  KKIK

A0A2P6QSD7 Uncharacterized protein2.8e-0945.45Show/hide
Query:  MGMEILEEFQPLTPLSSLQFIIPKDKTQEEEEEECLTPTAAAAR--LKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLH---IPSKKIK
        MG EI EEF+P+TP+  +    P   + E+  EECLTP + AAR  LK  +VCPPAPKKP  PRRKL       F+ P D  S+   +     P+KKI+
Subjt:  MGMEILEEFQPLTPLSSLQFIIPKDKTQEEEEEECLTPTAAAAR--LKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLH---IPSKKIK

A0A5N6R7V3 Uncharacterized protein1.1e-1044.34Show/hide
Query:  MGMEILEEFQPLTPLSSLQF---------IIPKDKTQEE--EEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYF-QLHI
        MG+EILEEF+P+TP+ ++           +   ++T+E   ++ EC TP ++   LK  +VCPPAPKKPRP RRKL+  P   F+ P DL S+ F  L  
Subjt:  MGMEILEEFQPLTPLSSLQF---------IIPKDKTQEE--EEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYF-QLHI

Query:  PSKKIK
        PSKKI+
Subjt:  PSKKIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGAAATTTTGGAGGAATTCCAACCACTTACACCATTATCTTCCCTTCAATTCATCATTCCCAAAGATAAAACACAAGAAGAAGAAGAAGAAGAATGTCTCAC
CCCCACCGCCGCCGCCGCCCGCCTGAAGCCCGCCGTGGTCTGTCCGCCGGCGCCCAAGAAACCTCGTCCTCCACGAAGGAAACTGAACTTTCTGCCACCTCCTTTCTTTG
AAGCTCCACAAGATCTCAATTCTCTCTATTTTCAACTTCATATTCCTTCCAAGAAAATCAAACCCATTTCTACTTCATCTTTCTATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGGAAATTTTGGAGGAATTCCAACCACTTACACCATTATCTTCCCTTCAATTCATCATTCCCAAAGATAAAACACAAGAAGAAGAAGAAGAAGAATGTCTCAC
CCCCACCGCCGCCGCCGCCCGCCTGAAGCCCGCCGTGGTCTGTCCGCCGGCGCCCAAGAAACCTCGTCCTCCACGAAGGAAACTGAACTTTCTGCCACCTCCTTTCTTTG
AAGCTCCACAAGATCTCAATTCTCTCTATTTTCAACTTCATATTCCTTCCAAGAAAATCAAACCCATTTCTACTTCATCTTTCTATCACTAA
Protein sequenceShow/hide protein sequence
MGMEILEEFQPLTPLSSLQFIIPKDKTQEEEEEECLTPTAAAARLKPAVVCPPAPKKPRPPRRKLNFLPPPFFEAPQDLNSLYFQLHIPSKKIKPISTSSFYH