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Clc06G14940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G14940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutaredoxin family protein
Genome locationClcChr06:25902698..25908878
RNA-Seq ExpressionClc06G14940
SyntenyClc06G14940
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004362 - glutathione-disulfide reductase activity (molecular function)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011767 - Glutaredoxin active site
IPR011899 - Glutaredoxin, eukaryotic/virial
IPR014025 - Glutaredoxin subgroup
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023354.1 Glutaredoxin-C4 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-8161.74Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP
        MAAT+SMRKMLTVSAAMVCAVAVAS+ GAS+S E+RFIKNTIASHQIVIFSKSYCPYCRRAKAVFKEL+KVP+VVELDQR+DGS IQDA  ALIGRRTVP
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP

Query:  QVFIDGKHLGGSDDT-------------VEAYESGKLGKL-----------------------------LATAVTMRV---RMIP--TVCAMASSSPESL
        QVF++GKH+GGSD               +++Y    + +L                             +   V +R    R+ P  ++  + S+   SL
Subjt:  QVFIDGKHLGGSDDT-------------VEAYESGKLGKL-----------------------------LATAVTMRV---RMIP--TVCAMASSSPESL

Query:  FVKKTIASHQT--VIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKD
        F      S  T  ++F    C YCETAK+VFKDL+KVPHVVELDQRDDGSAIQDALSALVGR TVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIK+
Subjt:  FVKKTIASHQT--VIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKD

XP_004146344.1 glutaredoxin-C4 [Cucumis sativus]8.3e-5489.06Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP
        MAATVSMRK+LT SAAMVCAVA+AS+CGASSSPES FIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGS +Q+ALS L GRRTVP
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP

Query:  QVFIDGKHLGGSDDTVEAYESGKLGKLL
        QVFIDGKH+GGSDDT+EAYESG+L KLL
Subjt:  QVFIDGKHLGGSDDTVEAYESGKLGKLL

XP_004146345.1 glutaredoxin-C4 [Cucumis sativus]6.8e-5692.68Show/hide
Query:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI
        + AT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+KVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI
Subjt:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI

Query:  GGSDDTVEAYESGELGKLLGIKD
        GGSDDTVEAYESGELGKLLGI++
Subjt:  GGSDDTVEAYESGELGKLLGIKD

XP_008453541.1 PREDICTED: glutaredoxin-C4-like [Cucumis melo]9.8e-5591.06Show/hide
Query:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI
        + AT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+KVPHVVELDQRDDGSAIQDALSALVGRH+VPQVFIDGKHI
Subjt:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI

Query:  GGSDDTVEAYESGELGKLLGIKD
        GGSDDTVEAYESGEL KLLGI++
Subjt:  GGSDDTVEAYESGELGKLLGIKD

XP_038878490.1 glutaredoxin-C4 [Benincasa hispida]8.3e-5487.5Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP
        M ATV+MRKMLT SAAMVCAVAV S+CGA SSPE+RFIKNTI+SHQIVIFSKSYCPYCRRAKAVFKEL KVPHVVELDQRDDGS IQDALSA +G RTVP
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP

Query:  QVFIDGKHLGGSDDTVEAYESGKLGKLL
        QVFI GKH+GGSDDTVEAYESG+LGKLL
Subjt:  QVFIDGKHLGGSDDTVEAYESGKLGKLL

TrEMBL top hitse value%identityAlignment
A0A0A0LUU4 Glutaredoxin domain-containing protein3.3e-5692.68Show/hide
Query:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI
        + AT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+KVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI
Subjt:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI

Query:  GGSDDTVEAYESGELGKLLGIKD
        GGSDDTVEAYESGELGKLLGI++
Subjt:  GGSDDTVEAYESGELGKLLGIKD

A0A0A0LXH3 Glutaredoxin domain-containing protein4.0e-5489.06Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP
        MAATVSMRK+LT SAAMVCAVA+AS+CGASSSPES FIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGS +Q+ALS L GRRTVP
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP

Query:  QVFIDGKHLGGSDDTVEAYESGKLGKLL
        QVFIDGKH+GGSDDT+EAYESG+L KLL
Subjt:  QVFIDGKHLGGSDDTVEAYESGKLGKLL

A0A1S3BVX6 glutaredoxin-C4-like4.7e-5591.06Show/hide
Query:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI
        + AT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+KVPHVVELDQRDDGSAIQDALSALVGRH+VPQVFIDGKHI
Subjt:  LLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHI

Query:  GGSDDTVEAYESGELGKLLGIKD
        GGSDDTVEAYESGEL KLLGI++
Subjt:  GGSDDTVEAYESGELGKLLGIKD

A0A5D3DXQ7 Glutaredoxin-C4-like3.4e-5388.28Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP
        MAATVSMRK+LT SAAMVCAVA+AS+C ASSSPES FIKNTIASHQIVIFSKSYCPYCRRAKAVFKEL+KVPHVVELDQRDDGS +Q+ALS L GRRTVP
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP

Query:  QVFIDGKHLGGSDDTVEAYESGKLGKLL
        QVFIDGKH+GGSDDTVEAYESG+L KLL
Subjt:  QVFIDGKHLGGSDDTVEAYESGKLGKLL

A0A6J1E059 glutaredoxin-C4-like5.8e-5386.72Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP
        MAAT+SMRKMLTVSAAMVCAVAVAS+ GAS+S E+RFIKNTIASHQIVIFSKSYCPYCRRAKAVFKEL+KVP+VVELDQR+DGS IQDA  ALIGRRTVP
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVP

Query:  QVFIDGKHLGGSDDTVEAYESGKLGKLL
        QVF++GKH+GGSDDT+EAYESGKL KLL
Subjt:  QVFIDGKHLGGSDDTVEAYESGKLGKLL

SwissProt top hitse value%identityAlignment
P55142 Glutaredoxin-C63.6e-2050.54Show/hide
Query:  KNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYESGKLGKLLATA
        K T+AS  +V++SKSYCP+C R K +F++L      +ELD   DGS +Q AL+   G+RTVP VFI+GKH+GG DDT+     GKL  LL  A
Subjt:  KNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYESGKLGKLLATA

Q0DAE4 Glutaredoxin-C81.2e-3663.08Show/hide
Query:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELH--KVPHVVELDQRDDGSVIQDALSALIGRRT
        MAA +  R    ++AA + A+A      + ++ +S F+K+T+ +H +VIFSKSYCPYCRRAKAVFKEL   K P+VVELDQR+DG  IQDALS ++GRRT
Subjt:  MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELH--KVPHVVELDQRDDGSVIQDALSALIGRRT

Query:  VPQVFIDGKHLGGSDDTVEAYESGKLGKLL
        VPQVF+ GKHLGGSDDTVEAYESGKL KLL
Subjt:  VPQVFIDGKHLGGSDDTVEAYESGKLGKLL

Q6H628 Monothiol glutaredoxin-S61.5e-2657.28Show/hide
Query:  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGK
        A A+ SP S FV+  I S++  IFSK+YCPY   AK +F+DL + P++VELD R+DG  IQ  L  LVGRHTVPQVF++G+H+GGSDDT  A+ +G+L K
Subjt:  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGK

Query:  LLG
        LLG
Subjt:  LLG

Q8LFQ6 Glutaredoxin-C42.5e-3760.48Show/hide
Query:  RKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGK
        R +  V   +     ++ +  A+SSPE+ F+K TI+SH+IVIFSKSYCPYC++AK+VF+EL +VP+VVELD+R+DG  IQ AL  ++GRRTVPQVFI+GK
Subjt:  RKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGK

Query:  HLGGSDDTVEAYESGKLGKLLATA
        HLGGSDDTV+AYESG+L KLL  +
Subjt:  HLGGSDDTVEAYESGKLGKLLATA

Q9FVX1 Glutaredoxin-C31.8e-2750Show/hide
Query:  SMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFID
        S R+++  +  +   +   S    +++  S F++N I S++IVIFSKSYCPYC R+K +F +L + P VVELDQR+DG  IQ  L   +GRRTVPQVF++
Subjt:  SMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFID

Query:  GKHLGGSDDTVEAYESGKLGKLLATA
        GKH+GGSDD   A ESG+L KLLA +
Subjt:  GKHLGGSDDTVEAYESGKLGKLLATA

Arabidopsis top hitse value%identityAlignment
AT1G77370.1 Glutaredoxin family protein1.3e-2850Show/hide
Query:  SMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFID
        S R+++  +  +   +   S    +++  S F++N I S++IVIFSKSYCPYC R+K +F +L + P VVELDQR+DG  IQ  L   +GRRTVPQVF++
Subjt:  SMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFID

Query:  GKHLGGSDDTVEAYESGKLGKLLATA
        GKH+GGSDD   A ESG+L KLLA +
Subjt:  GKHLGGSDDTVEAYESGKLGKLLATA

AT2G20270.1 Thioredoxin superfamily protein4.1e-1941.44Show/hide
Query:  AVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQ-RDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYE
        A++S   +S S     +K T+A + +V++SK++C Y  + K++FK L   P VVELDQ   +GS +Q+ L  + G+ TVP VFI GKH+GG  DT++ + 
Subjt:  AVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQ-RDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYE

Query:  SGKLGKLLATA
         G+L  +LA A
Subjt:  SGKLGKLLATA

AT5G20500.1 Glutaredoxin family protein1.8e-3860.48Show/hide
Query:  RKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGK
        R +  V   +     ++ +  A+SSPE+ F+K TI+SH+IVIFSKSYCPYC++AK+VF+EL +VP+VVELD+R+DG  IQ AL  ++GRRTVPQVFI+GK
Subjt:  RKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGK

Query:  HLGGSDDTVEAYESGKLGKLLATA
        HLGGSDDTV+AYESG+L KLL  +
Subjt:  HLGGSDDTVEAYESGKLGKLLATA

AT5G40370.1 Glutaredoxin family protein2.0e-1847.31Show/hide
Query:  KNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYESGKLGKLLATA
        K  + S  +V+FSK+YCPYC R K + ++L      VELD   DGS IQ  L+   G+RTVP VFI G H+GG D T   ++ GKL  LL  A
Subjt:  KNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYESGKLGKLLATA

AT5G63030.1 Thioredoxin superfamily protein6.0e-1845.16Show/hide
Query:  KNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYESGKLGKLLATA
        K  ++++ +V+FSK+YC YC+R K +  +L     V+ELD+  DG  IQ ALS   G+ TVP VFI G H+GG D  +E  + GKL  LL  A
Subjt:  KNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLGGSDDTVEAYESGKLGKLLATA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggcggcgacggtgagtatgaggaagatgctgacggtatcagcagccatggtctgcgccgtagccgtagcgtctatatgcggggcttcatcttccccagaatcacgctt
catcaaaaacaccatcgcctcccatcagatcgtcatattctccaagtcctattgcccgtactgtagaagggcaaaagctgttttcaaggaattgcacaaagttcctcatg
ttgttgagctggatcaaagagatgatgggagtgtcattcaagatgctctaagtgcacttattggaaggcggactgtacctcaagtgttcatagatggaaaacacttgggc
ggatcggatgatactgttgaagcatatgagagtgggaagttgggtaaactcctggcgacggcggtgacgatgagggtgaggatgataccgacggtgtgcgccatggcttc
atcttccccagaatcactctttgtcaagaaaaccatcgcctcccaccagaccgtcatcttctccaagtcctattgcccgtattgtgaaacggcaaaatctgttttcaagg
atttgcacaaagttcctcatgttgttgagctagatcaaagggatgatggcagtgctattcaggatgctctaagtgcacttgttggaaggcacactgtacctcaagtgttc
atagatggaaaacacataggtggatcagatgatactgtggaagcatatgagagtggagagttgggtaaacttctgggtattaaggattag
mRNA sequenceShow/hide mRNA sequence
atggcggcgacggtgagtatgaggaagatgctgacggtatcagcagccatggtctgcgccgtagccgtagcgtctatatgcggggcttcatcttccccagaatcacgctt
catcaaaaacaccatcgcctcccatcagatcgtcatattctccaagtcctattgcccgtactgtagaagggcaaaagctgttttcaaggaattgcacaaagttcctcatg
ttgttgagctggatcaaagagatgatgggagtgtcattcaagatgctctaagtgcacttattggaaggcggactgtacctcaagtgttcatagatggaaaacacttgggc
ggatcggatgatactgttgaagcatatgagagtgggaagttgggtaaactcctggcgacggcggtgacgatgagggtgaggatgataccgacggtgtgcgccatggcttc
atcttccccagaatcactctttgtcaagaaaaccatcgcctcccaccagaccgtcatcttctccaagtcctattgcccgtattgtgaaacggcaaaatctgttttcaagg
atttgcacaaagttcctcatgttgttgagctagatcaaagggatgatggcagtgctattcaggatgctctaagtgcacttgttggaaggcacactgtacctcaagtgttc
atagatggaaaacacataggtggatcagatgatactgtggaagcatatgagagtggagagttgggtaaacttctgggtattaaggattag
Protein sequenceShow/hide protein sequence
MAATVSMRKMLTVSAAMVCAVAVASICGASSSPESRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELHKVPHVVELDQRDDGSVIQDALSALIGRRTVPQVFIDGKHLG
GSDDTVEAYESGKLGKLLATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVF
IDGKHIGGSDDTVEAYESGELGKLLGIKD