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Clc06G15320 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G15320
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPollen preferential protein
Genome locationClcChr06:26222866..26223321
RNA-Seq ExpressionClc06G15320
SyntenyClc06G15320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058153.1 hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]1.3e-6282.88Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRS A+RH+SSLQD KIDA +ERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IF++YRMPAGLCRKAINRRKRHR+MK+K+LIQQRKA +MDFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP ++SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]1.7e-6281.46Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRS AIRH+S L+D KIDA RERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IFA+YRMPAGLCRKAINRRKRHR+MK+K+LIQQRKAAS DFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
        DGSVGP ++ +  H+  NDVA  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Subjt:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

TYK28512.1 hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]1.0e-6283.56Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRS A+RH+SSLQD KIDA +ERRQFAEVAGGSAAECTA+CCCCPWTVLNI IFA+YRMPAGLCRKAINRRKRHR+MK+K+LIQQRKA +MDFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP ++SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

XP_022933995.1 uncharacterized protein LOC111441234 [Cucurbita moschata]6.3e-5776.32Show/hide
Query:  MTRKVLLRSPAI-RHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDF
        M RKVLLRS AI R  SS + EK DASR++RQFAE+AGGSAA+CT ICCCCPWTV+N+VIFAVYRMP GLCRKA+NRRKRHR++K+K LIQQRKAAS +F
Subjt:  MTRKVLLRSPAI-RHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDF

Query:  TDGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
         D SV PA+ESFEA K  ND A  ED+ KLEEEMWGRFNQTGFWRSSSQRHE
Subjt:  TDGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]4.0e-6789.47Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRSPA+RH+S   DEKIDA +ERRQFAEVAGGSAAECTAICCCCPWTV+NIVIFAVYRMPAGLCRKA+NRRKRHRKMKKK LIQQRKA SMDFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVG-PAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
        DGSVG P MES EAHK  NDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
Subjt:  DGSVG-PAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

TrEMBL top hitse value%identityAlignment
A0A0A0LV48 Uncharacterized protein8.3e-6381.46Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRS AIRH+S L+D KIDA RERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IFA+YRMPAGLCRKAINRRKRHR+MK+K+LIQQRKAAS DFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
        DGSVGP ++ +  H+  NDVA  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Subjt:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

A0A5A7UQK6 Uncharacterized protein6.4e-6382.88Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRS A+RH+SSLQD KIDA +ERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IF++YRMPAGLCRKAINRRKRHR+MK+K+LIQQRKA +MDFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP ++SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

A0A5D3DY75 Uncharacterized protein4.9e-6383.56Show/hide
Query:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT
        MTRKVLLRS A+RH+SSLQD KIDA +ERRQFAEVAGGSAAECTA+CCCCPWTVLNI IFA+YRMPAGLCRKAINRRKRHR+MK+K+LIQQRKA +MDFT
Subjt:  MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFT

Query:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP ++SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

A0A6J1BZB0 uncharacterized protein LOC1110069729.9e-4870.32Show/hide
Query:  MTRKVLLRSPAIRH-KSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDF
        MT KVLLRSPAI H KSSL+DEK+DA RERRQFAEVAGGSAAECTAICCCCP TV+NIVIFA+Y+MPAGLCRKA+  RKRH KMKKK LIQQR+ AS +F
Subjt:  MTRKVLLRSPAIRH-KSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDF

Query:  TDGSVGP-AMESFEAHKTTNDVAD-----VEDLKKLEEEMWGRFNQTGFWRSSSQ
        TDGS GP  +  F+        A+      +DL  LEEEMWG+F+QTGFWRSSSQ
Subjt:  TDGSVGP-AMESFEAHKTTNDVAD-----VEDLKKLEEEMWGRFNQTGFWRSSSQ

A0A6J1F6E1 uncharacterized protein LOC1114412343.1e-5776.32Show/hide
Query:  MTRKVLLRSPAI-RHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDF
        M RKVLLRS AI R  SS + EK DASR++RQFAE+AGGSAA+CT ICCCCPWTV+N+VIFAVYRMP GLCRKA+NRRKRHR++K+K LIQQRKAAS +F
Subjt:  MTRKVLLRSPAI-RHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDF

Query:  TDGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
         D SV PA+ESFEA K  ND A  ED+ KLEEEMWGRFNQTGFWRSSSQRHE
Subjt:  TDGSVGPAMESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein8.6e-2036.2Show/hide
Query:  MTRKVLLRSPAI--RHKSSLQD---EKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAA
        MTR V+L+SP +    +S++++        S+ERR+  EVAGG+AAEC A+ CCCP  V+N+++ AVY++PA +C+KA  R KR R  +K+  +     A
Subjt:  MTRKVLLRSPAI--RHKSSLQD---EKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAA

Query:  SMDFTDGSVGPAMESFEAHKTTNDV---------ADVEDLKKLEEEMWGRFNQTGFWRSSSQR
             +GS             T ++          ++ D+ +LE EM  RF   GFWRS SQ+
Subjt:  SMDFTDGSVGPAMESFEAHKTTNDV---------ADVEDLKKLEEEMWGRFNQTGFWRSSSQR

AT3G11690.1 unknown protein4.1e-1432.88Show/hide
Query:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKR-----------------HRKMKKKFLIQQRKAASMDFTDGSVGPAMESFEAHK
        AE  GG+ A C A+ CCCP  ++N+++ A+Y++P G+CR+AI  R+R                 + +M++ F   +     +D  D S     ++F   K
Subjt:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKR-----------------HRKMKKKFLIQQRKAASMDFTDGSVGPAMESFEAHK

Query:  ----------TTNDVADVED--LKKLEEEMWGRFNQTGFWRSSSQR
                  TT +  D +D  +  LE+EMW RF   GFWRS SQR
Subjt:  ----------TTNDVADVED--LKKLEEEMWGRFNQTGFWRSSSQR

AT5G06380.1 unknown protein1.8e-1742.24Show/hide
Query:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFTDGSVGPAMESFEAHKTTNDVADVEDLKKLEEE
        AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCR+AI R +R R  KK+F+   R+      +  +V P +ES +  +   +  + E +  LE+E
Subjt:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFTDGSVGPAMESFEAHKTTNDVADVEDLKKLEEE

Query:  MWGRFNQTGFWRSSSQ
        MW RF   GFWRS SQ
Subjt:  MWGRFNQTGFWRSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGGAAGGTCCTCCTCCGATCTCCGGCTATACGTCATAAATCGTCGCTGCAAGACGAGAAAATCGATGCATCGCGAGAGAGACGGCAGTTCGCGGAGGTAGCCGG
TGGTTCAGCGGCGGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTTTGCCGGAAAGCGA
TAAACAGGAGAAAACGACACCGTAAAATGAAGAAGAAGTTTCTCATTCAGCAACGAAAGGCGGCCTCTATGGATTTCACGGATGGGTCGGTGGGGCCCGCAATGGAGAGT
TTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGTCGGTTCAATCAGACCGGGTTTTGGAGAAGTTCTTC
TCAAAGACATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGGAAGGTCCTCCTCCGATCTCCGGCTATACGTCATAAATCGTCGCTGCAAGACGAGAAAATCGATGCATCGCGAGAGAGACGGCAGTTCGCGGAGGTAGCCGG
TGGTTCAGCGGCGGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTTTGCCGGAAAGCGA
TAAACAGGAGAAAACGACACCGTAAAATGAAGAAGAAGTTTCTCATTCAGCAACGAAAGGCGGCCTCTATGGATTTCACGGATGGGTCGGTGGGGCCCGCAATGGAGAGT
TTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGTCGGTTCAATCAGACCGGGTTTTGGAGAAGTTCTTC
TCAAAGACATGAGTAA
Protein sequenceShow/hide protein sequence
MTRKVLLRSPAIRHKSSLQDEKIDASRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAINRRKRHRKMKKKFLIQQRKAASMDFTDGSVGPAMES
FEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE