; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G15970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G15970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:26816376..26817836
RNA-Seq ExpressionClc06G15970
SyntenyClc06G15970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023234.1 hypothetical protein SDJN02_14259 [Cucurbita argyrosperma subsp. argyrosperma]8.7e-6587.5Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK
        +PRRLVLQT PDNDPI A+RWPI H+KTGNS+AGAEFLDMIL KES+GEN SHQLATSPPFFWGSPPSR SNPLVQDEQFGNGNNIYQLCE PPSPST K
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK

Query:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        GGCTR KFGHRPAAVRIEGFDCL+ DARNCSIS VA
Subjt:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

XP_004138242.1 uncharacterized protein LOC101219468 [Cucumis sativus]5.4e-6791.97Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR
        +PRRLV QT PDNDPI AYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLA+SPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPST 
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR

Query:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KGGC R KFGHRPAAVRIEGFDCLN DARNCSISAVA
Subjt:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

XP_008453392.1 PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo]1.9e-6791.97Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR
        +PRRLV QT PDNDPI AYRWP+SH  TGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPSTR
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR

Query:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KGGC RTKFGHRPAAVRIEGFDCLN DARNCSISAVA
Subjt:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

XP_023516751.1 uncharacterized protein LOC111780556 [Cucurbita pepo subsp. pepo]8.7e-6587.5Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK
        +PRRLVLQT PDNDPI A+RWPI H+KTGNS+AGAEFLDMIL KES+GEN SHQLATSPPFFWGSPPSR SNPLVQDEQFGNGNNIYQLCE PPSPST K
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK

Query:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        GGCTR KFGHRPAAVRIEGFDCL+ DARNCSIS VA
Subjt:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

XP_038878157.1 uncharacterized protein LOC120070307 [Benincasa hispida]7.3e-7295.59Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK
        +PRRLVLQTPPDNDPIRAYRWPISHS+TGNSRAGAEFLDMILTKESYGENFSHQLATSPP FWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK

Query:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        GGC R KFGHRPAAVRIEGFDCLNHD+RNCSISAVA
Subjt:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

TrEMBL top hitse value%identityAlignment
A0A0A0LS24 Uncharacterized protein2.6e-6791.97Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR
        +PRRLV QT PDNDPI AYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLA+SPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPST 
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR

Query:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KGGC R KFGHRPAAVRIEGFDCLN DARNCSISAVA
Subjt:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

A0A1S3BVK5 uncharacterized protein LOC1034941249.1e-6891.97Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR
        +PRRLV QT PDNDPI AYRWP+SH  TGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPSTR
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR

Query:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KGGC RTKFGHRPAAVRIEGFDCLN DARNCSISAVA
Subjt:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

A0A5A7USD0 Uncharacterized protein9.1e-6891.97Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR
        +PRRLV QT PDNDPI AYRWP+SH  TGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPSTR
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTR

Query:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KGGC RTKFGHRPAAVRIEGFDCLN DARNCSISAVA
Subjt:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

A0A6J1C2G9 uncharacterized protein LOC1110068357.2e-6589.05Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCE-GPPSPSTR
        +PRRLVLQT PDNDPIRA+RWP++H KTGNS+AGAE LDMILTKESYGENFSHQLATSPPFFWGSPPSRASNP+VQDEQFGNGNN YQLCE GPPSPSTR
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCE-GPPSPSTR

Query:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KGGC R KFGHRPAAVRIEGFDCL  DARNCSISAVA
Subjt:  KGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

A0A6J1JA55 uncharacterized protein LOC1114849382.1e-6486.03Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK
        +PRRLVLQT PDNDPI A+RWPI H+KTGNS+AGAEFLDMIL KES+GEN SHQLATSPPFFWG+PPSR SNPLVQDEQFGNGNNIYQLCE PPSP+T K
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRK

Query:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        GGCTR KFGHRPAAVRIEGFDCL+ DARNCSIS VA
Subjt:  GGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.3e-1334.5Show/hide
Query:  FRVVRRNIRENEQPRRLVLQTPP-----DNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG---ENFSHQLATSPPFFWGSPPSRASNPLVQDEQ
        F  +RRN   +++   ++   P      ++   R+ RW ++H  +   S +G+E LD ILTK   G   ++ +  + T P FF GSPPSR SNPL +D  
Subjt:  FRVVRRNIRENEQPRRLVLQTPP-----DNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG---ENFSHQLATSPPFFWGSPPSRASNPLVQDEQ

Query:  FGNGNNIYQLCEGPPSPST------------RKGGC--TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        F        L    PSPST            R G C    T FG+ P  VR+ GFDC +  + N SIS +A
Subjt:  FGNGNNIYQLCEGPPSPST------------RKGGC--TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

AT1G13390.2 unknown protein1.3e-1334.5Show/hide
Query:  FRVVRRNIRENEQPRRLVLQTPP-----DNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG---ENFSHQLATSPPFFWGSPPSRASNPLVQDEQ
        F  +RRN   +++   ++   P      ++   R+ RW ++H  +   S +G+E LD ILTK   G   ++ +  + T P FF GSPPSR SNPL +D  
Subjt:  FRVVRRNIRENEQPRRLVLQTPP-----DNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG---ENFSHQLATSPPFFWGSPPSRASNPLVQDEQ

Query:  FGNGNNIYQLCEGPPSPST------------RKGGC--TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
        F        L    PSPST            R G C    T FG+ P  VR+ GFDC +  + N SIS +A
Subjt:  FGNGNNIYQLCEGPPSPST------------RKGGC--TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

AT1G68490.1 unknown protein1.8e-2044.67Show/hide
Query:  QPRRLVLQTPPDNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG-ENFSHQLATSP-PFFWGSPPSRASNPLVQDEQFGNG----NNIY--QL--
        +PRR+ L+    + P R+ R   SH  +   S+A  + LD+ILTK+ YG E  + Q+  SP PF  GSPPSR +NPL QD +F +     +++   QL  
Subjt:  QPRRLVLQTPPDNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG-ENFSHQLATSP-PFFWGSPPSRASNPLVQDEQFGNG----NNIY--QL--

Query:  --CEGPPSPSTRKGGC-TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA
             P S S RKGGC  R  FG+ P  VR+EGFDCL+ D+RNCSI A+A
Subjt:  --CEGPPSPSTRKGGC-TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

AT3G02555.1 unknown protein1.7e-2147.69Show/hide
Query:  NDPIRAYRWPISHSKTG---NSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGN-NIYQLCEGP--PSPSTRKGGCTRT
        N+ IR +R   S S      +S+AG + LD+   KES         + SPPFF GSPPSRA+NPL QD +FG+   N       P  PS S  K GC R 
Subjt:  NDPIRAYRWPISHSKTG---NSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGN-NIYQLCEGP--PSPSTRKGGCTRT

Query:  KFGHRPAAVRIEGFDCLNHDARNCSISAVA
        KFG +PA VR+EGFDCLN D  N SI A+A
Subjt:  KFGHRPAAVRIEGFDCLNHDARNCSISAVA

AT5G16110.1 unknown protein2.2e-1835.43Show/hide
Query:  SFSISLQILLSLNHGSLTSLLLSTCFLLSFSPFSSFKP---------SFLRRSSPFQIFRVVRRNIRENEQPRRLVLQTPPDNDPIRAYRWPISHSKTG-
        S S+SL + L  +  S +   L   F  +F   S  K          +F+ R    ++    R+++    +PRR+ L     N+ IR  R  +S +    
Subjt:  SFSISLQILLSLNHGSLTSLLLSTCFLLSFSPFSSFKP---------SFLRRSSPFQIFRVVRRNIRENEQPRRLVLQTPPDNDPIRAYRWPISHSKTG-

Query:  -NSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFG-------NGNNIY---QLCEGPPSPSTRKG-----GCTRTKFGHRPA
         +S+AGAE L++I  KE  G      L++SPP+F GSPPSRA+NPL QD +F        + N+ +       G PSPS+        GC R KFG    
Subjt:  -NSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFG-------NGNNIY---QLCEGPPSPSTRKG-----GCTRTKFGHRPA

Query:  AVRIEGFDCLNHDARNCSISAVA
        AVR+EGFDCLN D +N SI A+A
Subjt:  AVRIEGFDCLNHDARNCSISAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTT
CCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGC
CACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTT
GATATGATCCTCACCAAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGT
CCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGAC
CTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTT
CCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGC
CACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTT
GATATGATCCTCACCAAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGT
CCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGAC
CTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG
Protein sequenceShow/hide protein sequence
MNSELKLSCNSSFSISLQILLSLNHGSLTSLLLSTCFLLSFSPFSSFKPSFLRRSSPFQIFRVVRRNIRENEQPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFL
DMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA