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Clc06G16010 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G16010
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:26855475..26855858
RNA-Seq ExpressionClc06G16010
SyntenyClc06G16010
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058070.1 hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]3.8e-3170.4Show/hide
Query:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP
        MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+GML KSLS VVA AA++ EK+EEEKG  T APAPAE   
Subjt:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP

Query:  RGK-EKEVVEENGLP-LDLNIAVAV
        RGK +KEVVEENGL  LDLNIAVAV
Subjt:  RGK-EKEVVEENGLP-LDLNIAVAV

KAE8652459.1 hypothetical protein Csa_013196 [Cucumis sativus]8.3e-3469.23Show/hide
Query:  MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEK----EEEEKGPDTVAPAPAE
        MG+EKRK + EN   I+EKK K D+T    AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+GMLAKSLS VVA AAD+ EK    EEE+KG    AP+PAE
Subjt:  MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEK----EEEEKGPDTVAPAPAE

Query:  VKPRGKEKEVVEENGLPLDLNIAVAVPVID
        V  RGK KEVVEENGL LDLNIA+AV   D
Subjt:  VKPRGKEKEVVEENGLPLDLNIAVAVPVID

KAG6589551.1 hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2766.94Show/hide
Query:  MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAP--AEVK
        M R KRK + EN G   EKK K DET AA  +EPTDEEVEEFY ILRRMK+AAEYFGVEKGML KSL  V A AADR EKEEE+KG          A +K
Subjt:  MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAP--AEVK

Query:  PRGKEKEVVEENGLPLDLNIAVAV
          GK KEVV ENGL LDLNIAVAV
Subjt:  PRGKEKEVVEENGLPLDLNIAVAV

TYK28420.1 hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]3.8e-3170.4Show/hide
Query:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP
        MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+GML KSLS VVA AA++ EK+EEEKG  T APAPAE   
Subjt:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP

Query:  RGK-EKEVVEENGLP-LDLNIAVAV
        RGK +KEVVEENGL  LDLNIAVAV
Subjt:  RGK-EKEVVEENGLP-LDLNIAVAV

TrEMBL top hitse value%identityAlignment
A0A5A7USD1 Uncharacterized protein1.9e-3170.4Show/hide
Query:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP
        MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+GML KSLS VVA AA++ EK+EEEKG  T APAPAE   
Subjt:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP

Query:  RGK-EKEVVEENGLP-LDLNIAVAV
        RGK +KEVVEENGL  LDLNIAVAV
Subjt:  RGK-EKEVVEENGLP-LDLNIAVAV

A0A5D3DYW7 Uncharacterized protein1.9e-3170.4Show/hide
Query:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP
        MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+GML KSLS VVA AA++ EK+EEEKG  T APAPAE   
Subjt:  MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKP

Query:  RGK-EKEVVEENGLP-LDLNIAVAV
        RGK +KEVVEENGL  LDLNIAVAV
Subjt:  RGK-EKEVVEENGLP-LDLNIAVAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGA
GGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGG
CGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAAT
GGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGA
GGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGG
CGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAAT
GGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA
Protein sequenceShow/hide protein sequence
MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGKEKEVVEEN
GLPLDLNIAVAVPVIDI