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Clc06G16390 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G16390
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:27160609..27161440
RNA-Seq ExpressionClc06G16390
SyntenyClc06G16390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058005.1 hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa]3.0e-2870.8Show/hide
Query:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM
        M KTRNK+TK  KR +AR IAKRF+V K          EKLE+A+K+RM V    RT+ QIKFGISFTIPDRM TEINDKK ISGL PLRITRVPCGGPM
Subjt:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM

Query:  EFHEIVKEAEKVS
        EFHEIVKEAEK S
Subjt:  EFHEIVKEAEKVS

KAG6589576.1 hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3476.79Show/hide
Query:  MTKTRNKHTKAKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPME
        M KTR KH+K KR +AR IAK+FKVK LSIRQKLG TEK  K +K+ M  F IRRTLP+ KFGISFTIPDRMATEINDKK ISGLHPLRITRVP GGPME
Subjt:  MTKTRNKHTKAKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPME

Query:  FHEIVKEAEKVS
        FH +VKEAEK S
Subjt:  FHEIVKEAEKVS

KGN63749.1 hypothetical protein Csa_013996 [Cucumis sativus]2.4e-3073.45Show/hide
Query:  MTKTRNKHTKA-KRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM
        M KTRNK+ KA KR RAR IAKRF+V+  + RQKL  TEKLE+ +K+RM V    R L +IKFGISFTIPDRMATEI+DKK ISGLHPLRITRVP GGPM
Subjt:  MTKTRNKHTKA-KRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM

Query:  EFHEIVKEAEKVS
        EFHEIVKEAEK S
Subjt:  EFHEIVKEAEKVS

TKY46367.1 hypothetical protein E2542_SST28406 [Spatholobus suberectus]6.4e-1562.69Show/hide
Query:  FCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIVKEAEKVSQTFIL
        +C  R+ P+ KFGISFT+PDR+ +EINDKK I G HPLRITR+P GGP+EFH+I++EAEK S  + L
Subjt:  FCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIVKEAEKVSQTFIL

TYK28377.1 hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa]3.9e-2870.8Show/hide
Query:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM
        M KTRNK+TK  KR +AR IAK+F+V K          EKLE+A+K+RM V    RTL +IKFGISFTIPDRMATEINDKK ISGL PLRITRVPCGGPM
Subjt:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM

Query:  EFHEIVKEAEKVS
        EFHEIVKEAEK S
Subjt:  EFHEIVKEAEKVS

TrEMBL top hitse value%identityAlignment
A0A0A0LRV9 Uncharacterized protein1.2e-3073.45Show/hide
Query:  MTKTRNKHTKA-KRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM
        M KTRNK+ KA KR RAR IAKRF+V+  + RQKL  TEKLE+ +K+RM V    R L +IKFGISFTIPDRMATEI+DKK ISGLHPLRITRVP GGPM
Subjt:  MTKTRNKHTKA-KRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM

Query:  EFHEIVKEAEKVS
        EFHEIVKEAEK S
Subjt:  EFHEIVKEAEKVS

A0A2P5F4J0 Uncharacterized protein2.0e-1463.49Show/hide
Query:  FCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIVKEAEKVSQ
        FC  R  P+ KFGISF +PDR+A EI+DKK I G HP+RITR+P GGP EFH +V+EAEK S+
Subjt:  FCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIVKEAEKVSQ

A0A5A7UWL1 Uncharacterized protein1.4e-2870.8Show/hide
Query:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM
        M KTRNK+TK  KR +AR IAKRF+V K          EKLE+A+K+RM V    RT+ QIKFGISFTIPDRM TEINDKK ISGL PLRITRVPCGGPM
Subjt:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM

Query:  EFHEIVKEAEKVS
        EFHEIVKEAEK S
Subjt:  EFHEIVKEAEKVS

A0A5D3DX07 Uncharacterized protein1.9e-2870.8Show/hide
Query:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM
        M KTRNK+TK  KR +AR IAK+F+V K          EKLE+A+K+RM V    RTL +IKFGISFTIPDRMATEINDKK ISGL PLRITRVPCGGPM
Subjt:  MTKTRNKHTK-AKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPM

Query:  EFHEIVKEAEKVS
        EFHEIVKEAEK S
Subjt:  EFHEIVKEAEKVS

G7KP67 Uncharacterized protein9.0e-1563.64Show/hide
Query:  FCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIVKEAEKVSQTFI
        FC  R+ P+ KFGI+FTIPDR+ +EINDKK I G +PLRITR+P GGP EFH +V+EAEK S T +
Subjt:  FCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIVKEAEKVSQTFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAAAACAAGAAACAAACACACAAAGGCGAAGAGGTACCGAGCTCGAATGATAGCAAAACGGTTTAAAGTCAAGAAGCTGTCAATAAGGCAAAAGCTTGGC
TTCACAGAGAAGCTTGAAAAAGCCACAAAGCAAAGAATGAGGGTTTTTTGTATCAGAAGAACTCTGCCTCAGATCAAATTTGGGATATCATTCACAATTCCAGAC
AGAATGGCTACAGAGATTAATGACAAGAAGATGATAAGTGGATTACACCCACTGAGAATCACTAGAGTTCCATGTGGTGGGCCAATGGAGTTTCATGAAATTGTA
AAAGAAGCTGAGAAAGTTTCTCAAACTTTCATCCTTTCATTCCTAATCGTTCATATCTTTCGCTTCATTCTGAATTGTCCAACTGAGGAGAGCATTCAAACACCC
ACAGAGCAAGCCTTCTACCCATCTATTTCTCAACATTGCTCCCTGGCTACATTGAAGCTCAACCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAAAACAAGAAACAAACACACAAAGGCGAAGAGGTACCGAGCTCGAATGATAGCAAAACGGTTTAAAGTCAAGAAGCTGTCAATAAGGCAAAAGCTTGGC
TTCACAGAGAAGCTTGAAAAAGCCACAAAGCAAAGAATGAGGGTTTTTTGTATCAGAAGAACTCTGCCTCAGATCAAATTTGGGATATCATTCACAATTCCAGAC
AGAATGGCTACAGAGATTAATGACAAGAAGATGATAAGTGGATTACACCCACTGAGAATCACTAGAGTTCCATGTGGTGGGCCAATGGAGTTTCATGAAATTGTA
AAAGAAGCTGAGAAAGTTTCTCAAACTTTCATCCTTTCATTCCTAATCGTTCATATCTTTCGCTTCATTCTGAATTGTCCAACTGAGGAGAGCATTCAAACACCC
ACAGAGCAAGCCTTCTACCCATCTATTTCTCAACATTGCTCCCTGGCTACATTGAAGCTCAACCACTGA
Protein sequenceShow/hide protein sequence
MTKTRNKHTKAKRYRARMIAKRFKVKKLSIRQKLGFTEKLEKATKQRMRVFCIRRTLPQIKFGISFTIPDRMATEINDKKMISGLHPLRITRVPCGGPMEFHEIV
KEAEKVSQTFILSFLIVHIFRFILNCPTEESIQTPTEQAFYPSISQHCSLATLKLNH