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Clc06G16440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G16440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationClcChr06:27195740..27196593
RNA-Seq ExpressionClc06G16440
SyntenyClc06G16440
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]2.5e-1984.21Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPY V PP CDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]1.7e-2388.52Show/hide
Query:  HNFIDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        HNFIDTGPGPY VAPPMCDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  HNFIDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0975.56Show/hide
Query:  MCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        MCDPMQHGQSQPY  I+P QGETK Q V P  ET S+GDGFCRGL
Subjt:  MCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1780.7Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPYPVAPPMCDPMQHGQSQPY  I+P QGETK Q V P  ET S+GDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]3.7e-1882.46Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPYPVAPPMCDPMQHGQSQPY  I+P QGETKSQ V P  ET S+GDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein8.2e-2488.52Show/hide
Query:  HNFIDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        HNFIDTGPGPY VAPPMCDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  HNFIDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

A0A5A7UV38 Uncharacterized protein1.2e-1984.21Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPY V PP CDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like1.8e-1882.46Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPYPVAPPMCDPMQHGQSQPY  I+P QGETKSQ V P  ET S+GDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACTTTGCTCCTCCATTTGATTTCATACATATTATTCCCCTTGAGGCAGTTGGGCAGCATTAAGAATGTATCTTGTTGTTATGCATTTGGAGTTATAATTTTGGT
GGTGTCTTGCTGTGATGCAGCAGGTTACCTAATTTTCAAAAGAACTGCCTATTTTCTTTCCTCACAAACAACTGCTAACATTCATAATTTTATAGATACTGGACCAGGTC
CTTACCCAGTAGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGTCTCAGCCATACCCTCCAATTGTACCTTCTCAAGGGGAAACCAAGTCTCAAACTGTACCTCCT
TCAAGTGAAACTAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACTTTGCTCCTCCATTTGATTTCATACATATTATTCCCCTTGAGGCAGTTGGGCAGCATTAAGAATGTATCTTGTTGTTATGCATTTGGAGTTATAATTTTGGT
GGTGTCTTGCTGTGATGCAGCAGGTTACCTAATTTTCAAAAGAACTGCCTATTTTCTTTCCTCACAAACAACTGCTAACATTCATAATTTTATAGATACTGGACCAGGTC
CTTACCCAGTAGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGTCTCAGCCATACCCTCCAATTGTACCTTCTCAAGGGGAAACCAAGTCTCAAACTGTACCTCCT
TCAAGTGAAACTAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTGTAA
Protein sequenceShow/hide protein sequence
MFTLLLHLISYILFPLRQLGSIKNVSCCYAFGVIILVVSCCDAAGYLIFKRTAYFLSSQTTANIHNFIDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPP
SSETKSRGDGFCRGL