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Clc06G16450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G16450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionsuppressor of phytochrome b 5
Genome locationClcChr06:27200287..27201390
RNA-Seq ExpressionClc06G16450
SyntenyClc06G16450
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135291.1 uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]4.8e-3868.71Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASD--------EDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKG-----MKNPHG
        MEPSQIFGV+EECHSSESGWTMYIGSPA GSSDA +D        EDEDED++  G     NNQD+SDDSMASDASSGPSHQ  H F G       NPHG
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASD--------EDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKG-----MKNPHG

Query:  -----EVKSCLETKTKKPLMEKKKQRAEKKEVK-----VGQKPKSSVQSSSKVRKSILMGKRN
             EVK C ETKTKKPLME  KQRAE+KEVK     VGQKPK+SVQSSSKVRKSI MGK+N
Subjt:  -----EVKSCLETKTKKPLMEKKKQRAEKKEVK-----VGQKPKSSVQSSSKVRKSILMGKRN

XP_022921474.1 uncharacterized protein LOC111429737 isoform X2 [Cucurbita moschata]2.0e-3669.05Show/hide
Query:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---
        MVSSVMEPSQ+FGVSEECHSSESGWTMYIGSP  A+GSSD    AASDE+EDE  EHKGYY    NQDDSDDSMASDASSGPSHQQ  H F GMKNP   
Subjt:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---

Query:  -------HGEVKSCLET------KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
                 +  SC ET      K KKPL  KKKQRAE+KEVK   +PKSSVQSSSK RK I MGKRN
Subjt:  -------HGEVKSCLET------KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

XP_022987931.1 uncharacterized protein LOC111485335 isoform X2 [Cucurbita maxima]1.6e-3669.88Show/hide
Query:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---
        MVSSVMEPSQ+FGVSEECHSSESGWTMYIGSP  A+GSSD    AASDE   ED+EHKGYY    NQDDSDDSMASDASSGPSHQQ  H F GMKNP   
Subjt:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---

Query:  -------HGEVKSCLET----KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
                 +  SCLET    K KKPL  KKKQRAE+KEVK   +PKSSVQSSSK RKSI MGKR+
Subjt:  -------HGEVKSCLET----KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

XP_031737107.1 uncharacterized protein LOC105434528 [Cucumis sativus]6.1e-4175.36Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS-DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--
        MEPSQIFGVSEECHSSESGWTMYIGSPAN  S  A+ +D+DED+EHKGYYYAANN +DS DDSMASDASSGP HQ+   + FKGMKNP+GE+  CLET  
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS-DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--

Query:  KTKKPLME-KKKQRAEKKEVKVGQKPKSSVQSSSKVRK
          +KPLME KKKQRAE+KEV+VGQKPK+SVQSSSK  K
Subjt:  KTKKPLME-KKKQRAEKKEVKVGQKPKSSVQSSSKVRK

XP_038879181.1 protein SOB FIVE-LIKE 3-like [Benincasa hispida]1.4e-5388.03Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS-DDSMASDASSGPS-HQQEHQFKGMKNPHGEVKSCLETKTK
        MEPSQIFGVSEECHSSESGWTMYIGSP NGSSDAASD+DEDE  EHK YYYA NNQDDS DDSMASDASSGP+ HQQ + FKGMK+P+GE+  CLETKTK
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS-DDSMASDASSGPS-HQQEHQFKGMKNPHGEVKSCLETKTK

Query:  KPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
        KPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
Subjt:  KPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ4 Uncharacterized protein6.8e-4677.4Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS-DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--
        MEPSQIFGVSEECHSSESGWTMYIGSPAN  S  A+ +D+DED+EHKGYYYAANN +DS DDSMASDASSGP HQ+   + FKGMKNP+GE+  CLET  
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS-DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--

Query:  KTKKPLME-KKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
          +KPLME KKKQRAE+KEV+VGQKPK+SVQSSSKVRKSILM KRN
Subjt:  KTKKPLME-KKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

A0A6J1C092 uncharacterized protein LOC111007289 isoform X12.3e-3868.71Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASD--------EDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKG-----MKNPHG
        MEPSQIFGV+EECHSSESGWTMYIGSPA GSSDA +D        EDEDED++  G     NNQD+SDDSMASDASSGPSHQ  H F G       NPHG
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASD--------EDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKG-----MKNPHG

Query:  -----EVKSCLETKTKKPLMEKKKQRAEKKEVK-----VGQKPKSSVQSSSKVRKSILMGKRN
             EVK C ETKTKKPLME  KQRAE+KEVK     VGQKPK+SVQSSSKVRKSI MGK+N
Subjt:  -----EVKSCLETKTKKPLMEKKKQRAEKKEVK-----VGQKPKSSVQSSSKVRKSILMGKRN

A0A6J1E0K6 uncharacterized protein LOC111429737 isoform X29.8e-3769.05Show/hide
Query:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---
        MVSSVMEPSQ+FGVSEECHSSESGWTMYIGSP  A+GSSD    AASDE+EDE  EHKGYY    NQDDSDDSMASDASSGPSHQQ  H F GMKNP   
Subjt:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---

Query:  -------HGEVKSCLET------KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
                 +  SC ET      K KKPL  KKKQRAE+KEVK   +PKSSVQSSSK RK I MGKRN
Subjt:  -------HGEVKSCLET------KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

A0A6J1JFR5 uncharacterized protein LOC111485335 isoform X27.5e-3769.88Show/hide
Query:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---
        MVSSVMEPSQ+FGVSEECHSSESGWTMYIGSP  A+GSSD    AASDE   ED+EHKGYY    NQDDSDDSMASDASSGPSHQQ  H F GMKNP   
Subjt:  MVSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP---

Query:  -------HGEVKSCLET----KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
                 +  SCLET    K KKPL  KKKQRAE+KEVK   +PKSSVQSSSK RKSI MGKR+
Subjt:  -------HGEVKSCLET----KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

A0A6J1JKS2 uncharacterized protein LOC111485335 isoform X14.1e-3567.88Show/hide
Query:  VSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP----
        + +VMEPSQ+FGVSEECHSSESGWTMYIGSP  A+GSSD    AASDE   ED+EHKGYY    NQDDSDDSMASDASSGPSHQQ  H F GMKNP    
Subjt:  VSSVMEPSQIFGVSEECHSSESGWTMYIGSP--ANGSSD----AASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQ-EHQFKGMKNP----

Query:  ------HGEVKSCLET----KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
                +  SCLET    K KKPL  KKKQRAE+KEVK   +PKSSVQSSSK RKSI MGKR+
Subjt:  ------HGEVKSCLET----KTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN

SwissProt top hitse value%identityAlignment
Q9FKQ9 Protein SOB FIVE-LIKE 47.8e-0749.37Show/hide
Query:  EECHSSESGWTMYIGSPANGSSDAASDEDE--DEDKEHKGY---------YYAANNQDDSDDSMASDASSGPSHQQEHQ
        EEC SSESGWT Y+ SP         DEDE  DED  ++GY          +      DSDDSMASDASSGP++Q+ HQ
Subjt:  EECHSSESGWTMYIGSPANGSSDAASDEDE--DEDKEHKGY---------YYAANNQDDSDDSMASDASSGPSHQQEHQ

Q9LEZ1 Protein SUPPRESSOR OF PHYTOCHROME B 53.6e-0434.23Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKP
        ME + IFG  E+C S ESGWTMY+ S ++   D     D+DE++E            D  DSM SDASSGP     +           +K   E + +  
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKP

Query:  LMEKKKQRAEK
        + +KKK+  E+
Subjt:  LMEKKKQRAEK

Arabidopsis top hitse value%identityAlignment
AT3G30580.1 unknown protein6.4e-0436Show/hide
Query:  EECHSSESGWTMYIGSPANGSSDAASDEDEDE----DKEHKGYYYAANNQDDSDDSMASDASSGPS-HQQEHQFK-----GMKNPHGEVKSC----LETK
        EEC SSESGWT YI S      +   DE   E    +K+ + Y        DSDDSMASDASSGPS HQ  ++ K      ++N  GE        ++ K
Subjt:  EECHSSESGWTMYIGSPANGSSDAASDEDEDE----DKEHKGYYYAANNQDDSDDSMASDASSGPS-HQQEHQFK-----GMKNPHGEVKSC----LETK

Query:  TKKPLMEKKKQRAEKKEVKVGQKPK
            L+ +KK++ + +      K K
Subjt:  TKKPLMEKKKQRAEKKEVKVGQKPK

AT5G08150.1 suppressor of phytochrome b 52.6e-0534.23Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKP
        ME + IFG  E+C S ESGWTMY+ S ++   D     D+DE++E            D  DSM SDASSGP     +           +K   E + +  
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKP

Query:  LMEKKKQRAEK
        + +KKK+  E+
Subjt:  LMEKKKQRAEK

AT5G38790.1 unknown protein5.6e-0849.37Show/hide
Query:  EECHSSESGWTMYIGSPANGSSDAASDEDE--DEDKEHKGY---------YYAANNQDDSDDSMASDASSGPSHQQEHQ
        EEC SSESGWT Y+ SP         DEDE  DED  ++GY          +      DSDDSMASDASSGP++Q+ HQ
Subjt:  EECHSSESGWTMYIGSPANGSSDAASDEDE--DEDKEHKGY---------YYAANNQDDSDDSMASDASSGPSHQQEHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCTTCAGTTATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGGTTCAAG
TGATGCAGCTTCTGATGAAGATGAGGATGAAGATAAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTT
CAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCTCATGGTGAAGTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAG
AAGCAAAGAGCTGAGAAAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATTCTCTCTAGTTTTGTAAGCCTGAGCCAATCCATCTCTCTGCATTTAAAGCTACCCTTTTCTAATTATGACAGAATTCAGAGAAGAGTTAAGATGATTATTGCCATCTT
CTCTTAAGAAACCCAAATGACCAAATGAACCAACCCCATGTCCTTTCAAATTAGCATGTATATACCTTTTGCAATAACAACTATTTCTCTTTCATTGACACCTTCTAGCT
GTCTTCTGCTCACTGAAAGTCAGAAAATTTATTTGCCTTTGGATTTCCAGGTGGTGCAGTGAGGGTTTTTATCTATCTACCCATTAAAAACTTGTTTTTCCTTTCAAAAT
TTGGGTTTTGTAGCTTTCATATTATTAGATAAGCCTGTTTGGATCAGAGAGGTAGCAAAATGGCATGAATGGTCTCTTCAGTTATGGAACCTTCCCAAATTTTTGGAGTT
TCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGAGGATGAAGATAAAGAACA
TAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGA
AAAATCCTCATGGTGAAGTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAAAAAAGAAGTCAAAGTGGGACAAAAG
CCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAGCCAAGCTAGTTCTTCTTCTTCTTCTTCTTTGGGTATTTCATTTA
TGCTTTGCTGTAGGCTGAAAAAAAATGAACACTTGGAGAAAAAAAAAAATGAGCTGTTTCTTTTACAAGACAATATTTTGGTA
Protein sequenceShow/hide protein sequence
MVSSVMEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKPLMEKK
KQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN